Gene : ROL5 A. thaliana TAIR10
Primary Identifier:  ? AT2G44270 Defline:  (1 of 2) K14168 - cytoplasmic tRNA 2-thiolation protein 1 (CTU1, NCS6)
Genomic Order:  3841 Name:  ? AT2G44270
Secondary Identifier:  ? PAC:19643274
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G44270 0.5kb upstream 0.5kb upstream 2913 true Chr2: 18297861-18300773 Arabidopsis thaliana
AT2G44270 0.5kb upstream 0.5kb upstream 500 false Chr2: 18300274-18300773 Arabidopsis thaliana
AT2G44270 0.5kb downstream 0.5kb downstream 2913 true Chr2: 18297361-18300273 Arabidopsis thaliana
AT2G44270 0.5kb downstream 0.5kb downstream 500 false Chr2: 18297361-18297860 Arabidopsis thaliana
AT2G44270 1.0kb upstream 1.0kb upstream 3413 true Chr2: 18297861-18301273 Arabidopsis thaliana
AT2G44270 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18300274-18301273 Arabidopsis thaliana
AT2G44270 1.0kb downstream 1.0kb downstream 3413 true Chr2: 18296861-18300273 Arabidopsis thaliana
AT2G44270 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18296861-18297860 Arabidopsis thaliana
AT2G44270 2.0kb upstream 2.0kb upstream 4413 true Chr2: 18297861-18302273 Arabidopsis thaliana
AT2G44270 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18300274-18302273 Arabidopsis thaliana
AT2G44270 2.0kb downstream 2.0kb downstream 4413 true Chr2: 18295861-18300273 Arabidopsis thaliana
AT2G44270 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18295861-18297860 Arabidopsis thaliana
AT2G44270 5.0kb upstream 5.0kb upstream 7413 true Chr2: 18297861-18305273 Arabidopsis thaliana
AT2G44270 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18300274-18305273 Arabidopsis thaliana
AT2G44270 5.0kb downstream 5.0kb downstream 7413 true Chr2: 18292861-18300273 Arabidopsis thaliana
AT2G44270 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18292861-18297860 Arabidopsis thaliana
AT2G44270 10.0kb upstream 10.0kb upstream 12413 true Chr2: 18297861-18310273 Arabidopsis thaliana
AT2G44270 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18300274-18310273 Arabidopsis thaliana
AT2G44270 10.0kb downstream 10.0kb downstream 12413 true Chr2: 18287861-18300273 Arabidopsis thaliana
AT2G44270 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18287861-18297860 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364200 5261 Brassicaceae View MSA
123829220 5264 Brassicales-Malvales View MSA
124347026 5266 SBM View MSA
124240042 5268 Malvidae View MSA
124064054 5270 Rosid View MSA
123742084 5271 Pentapetalae View MSA
122790612 5272 Eudicot View MSA
122048376 5273 Angiosperm View MSA
121346123 5274 Embryophyte View MSA
123424890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.962        
cufflinks 9.957        
cufflinks 3.291        
cufflinks 10.069        
cufflinks 2.916       Low
cufflinks 8.515        

0 Strain