Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-1081 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT2G43880 0.5kb upstream | 0.5kb | upstream | 1949 | true | Chr2: 18172534-18174482 | Arabidopsis thaliana |
AT2G43880 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr2: 18172534-18173033 | Arabidopsis thaliana |
AT2G43880 0.5kb downstream | 0.5kb | downstream | 1949 | true | Chr2: 18173034-18174982 | Arabidopsis thaliana |
AT2G43880 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr2: 18174483-18174982 | Arabidopsis thaliana |
AT2G43880 1.0kb upstream | 1.0kb | upstream | 2449 | true | Chr2: 18172034-18174482 | Arabidopsis thaliana |
AT2G43880 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr2: 18172034-18173033 | Arabidopsis thaliana |
AT2G43880 1.0kb downstream | 1.0kb | downstream | 2449 | true | Chr2: 18173034-18175482 | Arabidopsis thaliana |
AT2G43880 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr2: 18174483-18175482 | Arabidopsis thaliana |
AT2G43880 2.0kb upstream | 2.0kb | upstream | 3449 | true | Chr2: 18171034-18174482 | Arabidopsis thaliana |
AT2G43880 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr2: 18171034-18173033 | Arabidopsis thaliana |
AT2G43880 2.0kb downstream | 2.0kb | downstream | 3449 | true | Chr2: 18173034-18176482 | Arabidopsis thaliana |
AT2G43880 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr2: 18174483-18176482 | Arabidopsis thaliana |
AT2G43880 5.0kb upstream | 5.0kb | upstream | 6449 | true | Chr2: 18168034-18174482 | Arabidopsis thaliana |
AT2G43880 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr2: 18168034-18173033 | Arabidopsis thaliana |
AT2G43880 5.0kb downstream | 5.0kb | downstream | 6449 | true | Chr2: 18173034-18179482 | Arabidopsis thaliana |
AT2G43880 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr2: 18174483-18179482 | Arabidopsis thaliana |
AT2G43880 10.0kb upstream | 10.0kb | upstream | 11449 | true | Chr2: 18163034-18174482 | Arabidopsis thaliana |
AT2G43880 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr2: 18163034-18173033 | Arabidopsis thaliana |
AT2G43880 10.0kb downstream | 10.0kb | downstream | 11449 | true | Chr2: 18173034-18184482 | Arabidopsis thaliana |
AT2G43880 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr2: 18174483-18184482 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122367803 | 5261 | Brassicaceae | View MSA |
123799425 | 5264 | Brassicales-Malvales | View MSA |
124296947 | 5266 | SBM | View MSA |
124243771 | 5268 | Malvidae | View MSA |
124074410 | 5270 | Rosid | View MSA |
123753570 | 5271 | Pentapetalae | View MSA |
122797497 | 5272 | Eudicot | View MSA |
122051291 | 5273 | Angiosperm | View MSA |
121350352 | 5274 | Embryophyte | View MSA |
123381691 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.782 | ||||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 1.116 | ||||
cufflinks | 0.011 | Low | Low | ||
cufflinks | 2.387 |