Gene : AT2G43800 A. thaliana TAIR10
Defline:  (1 of 4) PTHR23213//PTHR23213:SF220 - FORMIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3789
Name:  ? AT2G43800 Secondary Identifier:  ? PAC:19642141
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43800 0.5kb upstream 0.5kb upstream 3677 true Chr2: 18145221-18148897 Arabidopsis thaliana
AT2G43800 0.5kb upstream 0.5kb upstream 500 false Chr2: 18145221-18145720 Arabidopsis thaliana
AT2G43800 0.5kb downstream 0.5kb downstream 3677 true Chr2: 18145721-18149397 Arabidopsis thaliana
AT2G43800 0.5kb downstream 0.5kb downstream 500 false Chr2: 18148898-18149397 Arabidopsis thaliana
AT2G43800 1.0kb upstream 1.0kb upstream 4177 true Chr2: 18144721-18148897 Arabidopsis thaliana
AT2G43800 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18144721-18145720 Arabidopsis thaliana
AT2G43800 1.0kb downstream 1.0kb downstream 4177 true Chr2: 18145721-18149897 Arabidopsis thaliana
AT2G43800 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18148898-18149897 Arabidopsis thaliana
AT2G43800 2.0kb upstream 2.0kb upstream 5177 true Chr2: 18143721-18148897 Arabidopsis thaliana
AT2G43800 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18143721-18145720 Arabidopsis thaliana
AT2G43800 2.0kb downstream 2.0kb downstream 5177 true Chr2: 18145721-18150897 Arabidopsis thaliana
AT2G43800 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18148898-18150897 Arabidopsis thaliana
AT2G43800 5.0kb upstream 5.0kb upstream 8177 true Chr2: 18140721-18148897 Arabidopsis thaliana
AT2G43800 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18140721-18145720 Arabidopsis thaliana
AT2G43800 5.0kb downstream 5.0kb downstream 8177 true Chr2: 18145721-18153897 Arabidopsis thaliana
AT2G43800 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18148898-18153897 Arabidopsis thaliana
AT2G43800 10.0kb upstream 10.0kb upstream 13177 true Chr2: 18135721-18148897 Arabidopsis thaliana
AT2G43800 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18135721-18145720 Arabidopsis thaliana
AT2G43800 10.0kb downstream 10.0kb downstream 13177 true Chr2: 18145721-18158897 Arabidopsis thaliana
AT2G43800 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18148898-18158897 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372682 5261 Brassicaceae View MSA
123839055 5264 Brassicales-Malvales View MSA
124343406 5266 SBM View MSA
124244710 5268 Malvidae View MSA
124073350 5270 Rosid View MSA
123751322 5271 Pentapetalae View MSA
122795488 5272 Eudicot View MSA
122050252 5273 Angiosperm View MSA
121351212 5274 Embryophyte View MSA
123428124 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.248        
cufflinks 49.66     High  
cufflinks 5.608        
cufflinks 43.911     High  
cufflinks 5.696        
cufflinks 48.395     High  

0 Strain