Gene : AT2G43670 A. thaliana TAIR10
Defline:  (1 of 13) PTHR31044:SF19 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3774
Name:  ? AT2G43670 Secondary Identifier:  ? PAC:19641748
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43670 0.5kb upstream 0.5kb upstream 1419 true Chr2: 18104625-18106043 Arabidopsis thaliana
AT2G43670 0.5kb upstream 0.5kb upstream 500 false Chr2: 18104625-18105124 Arabidopsis thaliana
AT2G43670 0.5kb downstream 0.5kb downstream 1419 true Chr2: 18105125-18106543 Arabidopsis thaliana
AT2G43670 0.5kb downstream 0.5kb downstream 500 false Chr2: 18106044-18106543 Arabidopsis thaliana
AT2G43670 1.0kb upstream 1.0kb upstream 1919 true Chr2: 18104125-18106043 Arabidopsis thaliana
AT2G43670 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18104125-18105124 Arabidopsis thaliana
AT2G43670 1.0kb downstream 1.0kb downstream 1919 true Chr2: 18105125-18107043 Arabidopsis thaliana
AT2G43670 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18106044-18107043 Arabidopsis thaliana
AT2G43670 2.0kb upstream 2.0kb upstream 2919 true Chr2: 18103125-18106043 Arabidopsis thaliana
AT2G43670 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18103125-18105124 Arabidopsis thaliana
AT2G43670 2.0kb downstream 2.0kb downstream 2919 true Chr2: 18105125-18108043 Arabidopsis thaliana
AT2G43670 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18106044-18108043 Arabidopsis thaliana
AT2G43670 5.0kb upstream 5.0kb upstream 5919 true Chr2: 18100125-18106043 Arabidopsis thaliana
AT2G43670 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18100125-18105124 Arabidopsis thaliana
AT2G43670 5.0kb downstream 5.0kb downstream 5919 true Chr2: 18105125-18111043 Arabidopsis thaliana
AT2G43670 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18106044-18111043 Arabidopsis thaliana
AT2G43670 10.0kb upstream 10.0kb upstream 10919 true Chr2: 18095125-18106043 Arabidopsis thaliana
AT2G43670 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18095125-18105124 Arabidopsis thaliana
AT2G43670 10.0kb downstream 10.0kb downstream 10919 true Chr2: 18105125-18116043 Arabidopsis thaliana
AT2G43670 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18106044-18116043 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380380 5261 Brassicaceae View MSA
123802686 5264 Brassicales-Malvales View MSA
124299859 5266 SBM View MSA
124151169 5268 Malvidae View MSA
124038019 5270 Rosid View MSA
123750670 5271 Pentapetalae View MSA
122789328 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.078     Low  
cufflinks 5.801        
cufflinks 0.047     Low  
cufflinks 7.105        
cufflinks 0.035     Low Low
cufflinks 4.857        

0 Strain