Gene : AT2G43660 A. thaliana TAIR10
Defline:  (1 of 71) 3.2.1.39 - Glucan endo-1,3-beta-D-glucosidase / Laminarinase Genomic Order:  3773
Name:  ? AT2G43660 Secondary Identifier:  ? PAC:19643541
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43660 0.5kb upstream 0.5kb upstream 1331 true Chr2: 18103751-18105081 Arabidopsis thaliana
AT2G43660 0.5kb upstream 0.5kb upstream 500 false Chr2: 18104582-18105081 Arabidopsis thaliana
AT2G43660 0.5kb downstream 0.5kb downstream 1331 true Chr2: 18103251-18104581 Arabidopsis thaliana
AT2G43660 0.5kb downstream 0.5kb downstream 500 false Chr2: 18103251-18103750 Arabidopsis thaliana
AT2G43660 1.0kb upstream 1.0kb upstream 1831 true Chr2: 18103751-18105581 Arabidopsis thaliana
AT2G43660 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18104582-18105581 Arabidopsis thaliana
AT2G43660 1.0kb downstream 1.0kb downstream 1831 true Chr2: 18102751-18104581 Arabidopsis thaliana
AT2G43660 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18102751-18103750 Arabidopsis thaliana
AT2G43660 2.0kb upstream 2.0kb upstream 2831 true Chr2: 18103751-18106581 Arabidopsis thaliana
AT2G43660 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18104582-18106581 Arabidopsis thaliana
AT2G43660 2.0kb downstream 2.0kb downstream 2831 true Chr2: 18101751-18104581 Arabidopsis thaliana
AT2G43660 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18101751-18103750 Arabidopsis thaliana
AT2G43660 5.0kb upstream 5.0kb upstream 5831 true Chr2: 18103751-18109581 Arabidopsis thaliana
AT2G43660 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18104582-18109581 Arabidopsis thaliana
AT2G43660 5.0kb downstream 5.0kb downstream 5831 true Chr2: 18098751-18104581 Arabidopsis thaliana
AT2G43660 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18098751-18103750 Arabidopsis thaliana
AT2G43660 10.0kb upstream 10.0kb upstream 10831 true Chr2: 18103751-18114581 Arabidopsis thaliana
AT2G43660 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18104582-18114581 Arabidopsis thaliana
AT2G43660 10.0kb downstream 10.0kb downstream 10831 true Chr2: 18093751-18104581 Arabidopsis thaliana
AT2G43660 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18093751-18103750 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380380 5261 Brassicaceae View MSA
123802686 5264 Brassicales-Malvales View MSA
124299859 5266 SBM View MSA
124151169 5268 Malvidae View MSA
124038019 5270 Rosid View MSA
123750670 5271 Pentapetalae View MSA
122789328 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.417        
cufflinks 0.013     Low Low
cufflinks 0.866        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.616        

0 Strain