Gene : AT2G43460 A. thaliana TAIR10
Defline:  (1 of 2) K02923 - large subunit ribosomal protein L38e (RP-L38e, RPL38) Genomic Order:  3751
Name:  ? AT2G43460 Secondary Identifier:  ? PAC:19639945
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43460 0.5kb upstream 0.5kb upstream 1898 true Chr2: 18046004-18047901 Arabidopsis thaliana
AT2G43460 0.5kb upstream 0.5kb upstream 500 false Chr2: 18047402-18047901 Arabidopsis thaliana
AT2G43460 0.5kb downstream 0.5kb downstream 1898 true Chr2: 18045504-18047401 Arabidopsis thaliana
AT2G43460 0.5kb downstream 0.5kb downstream 500 false Chr2: 18045504-18046003 Arabidopsis thaliana
AT2G43460 1.0kb upstream 1.0kb upstream 2398 true Chr2: 18046004-18048401 Arabidopsis thaliana
AT2G43460 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18047402-18048401 Arabidopsis thaliana
AT2G43460 1.0kb downstream 1.0kb downstream 2398 true Chr2: 18045004-18047401 Arabidopsis thaliana
AT2G43460 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18045004-18046003 Arabidopsis thaliana
AT2G43460 2.0kb upstream 2.0kb upstream 3398 true Chr2: 18046004-18049401 Arabidopsis thaliana
AT2G43460 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18047402-18049401 Arabidopsis thaliana
AT2G43460 2.0kb downstream 2.0kb downstream 3398 true Chr2: 18044004-18047401 Arabidopsis thaliana
AT2G43460 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18044004-18046003 Arabidopsis thaliana
AT2G43460 5.0kb upstream 5.0kb upstream 6398 true Chr2: 18046004-18052401 Arabidopsis thaliana
AT2G43460 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18047402-18052401 Arabidopsis thaliana
AT2G43460 5.0kb downstream 5.0kb downstream 6398 true Chr2: 18041004-18047401 Arabidopsis thaliana
AT2G43460 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18041004-18046003 Arabidopsis thaliana
AT2G43460 10.0kb upstream 10.0kb upstream 11398 true Chr2: 18046004-18057401 Arabidopsis thaliana
AT2G43460 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18047402-18057401 Arabidopsis thaliana
AT2G43460 10.0kb downstream 10.0kb downstream 11398 true Chr2: 18036004-18047401 Arabidopsis thaliana
AT2G43460 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18036004-18046003 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029666 5273 Angiosperm View MSA
122380033 5261 Brassicaceae View MSA
123839814 5264 Brassicales-Malvales View MSA
124350744 5266 SBM View MSA
124254089 5268 Malvidae View MSA
124074373 5270 Rosid View MSA
123750152 5271 Pentapetalae View MSA
122794948 5272 Eudicot View MSA
121351263 5274 Embryophyte View MSA
123428665 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 78.491     High  
cufflinks 127.036     High  
cufflinks 71.83     High  
cufflinks 122.829     High  
cufflinks 58.51     High Low
cufflinks 149.46     High High

0 Strain