Gene : AT2G43420 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10366//PTHR10366:SF386 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 Genomic Order:  3746
Name:  ? AT2G43420 Secondary Identifier:  ? PAC:19640295
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43420 0.5kb upstream 0.5kb upstream 4331 true Chr2: 18031268-18035598 Arabidopsis thaliana
AT2G43420 0.5kb upstream 0.5kb upstream 500 false Chr2: 18035099-18035598 Arabidopsis thaliana
AT2G43420 0.5kb downstream 0.5kb downstream 4331 true Chr2: 18030768-18035098 Arabidopsis thaliana
AT2G43420 0.5kb downstream 0.5kb downstream 500 false Chr2: 18030768-18031267 Arabidopsis thaliana
AT2G43420 1.0kb upstream 1.0kb upstream 4831 true Chr2: 18031268-18036098 Arabidopsis thaliana
AT2G43420 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18035099-18036098 Arabidopsis thaliana
AT2G43420 1.0kb downstream 1.0kb downstream 4831 true Chr2: 18030268-18035098 Arabidopsis thaliana
AT2G43420 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18030268-18031267 Arabidopsis thaliana
AT2G43420 2.0kb upstream 2.0kb upstream 5831 true Chr2: 18031268-18037098 Arabidopsis thaliana
AT2G43420 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18035099-18037098 Arabidopsis thaliana
AT2G43420 2.0kb downstream 2.0kb downstream 5831 true Chr2: 18029268-18035098 Arabidopsis thaliana
AT2G43420 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18029268-18031267 Arabidopsis thaliana
AT2G43420 5.0kb upstream 5.0kb upstream 8831 true Chr2: 18031268-18040098 Arabidopsis thaliana
AT2G43420 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18035099-18040098 Arabidopsis thaliana
AT2G43420 5.0kb downstream 5.0kb downstream 8831 true Chr2: 18026268-18035098 Arabidopsis thaliana
AT2G43420 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18026268-18031267 Arabidopsis thaliana
AT2G43420 10.0kb upstream 10.0kb upstream 13831 true Chr2: 18031268-18045098 Arabidopsis thaliana
AT2G43420 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18035099-18045098 Arabidopsis thaliana
AT2G43420 10.0kb downstream 10.0kb downstream 13831 true Chr2: 18021268-18035098 Arabidopsis thaliana
AT2G43420 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18021268-18031267 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366865 5261 Brassicaceae View MSA
123838151 5264 Brassicales-Malvales View MSA
124340790 5266 SBM View MSA
124252944 5268 Malvidae View MSA
124067193 5270 Rosid View MSA
123744722 5271 Pentapetalae View MSA
122787182 5272 Eudicot View MSA
122048843 5273 Angiosperm View MSA
121311135 5274 Embryophyte View MSA
123427810 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.745        
cufflinks 11.174        
cufflinks 5.822       Low
cufflinks 11.668        
cufflinks 7.075        
cufflinks 11.434        

0 Strain