Gene : AT2G43140 A. thaliana TAIR10
Defline:  (1 of 2) PTHR16223:SF10 - TRANSCRIPTION FACTOR BHLH128-RELATED Genomic Order:  3716
Name:  ? AT2G43140 Secondary Identifier:  ? PAC:19641369
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43140 0.5kb upstream 0.5kb upstream 4662 true Chr2: 17931525-17936186 Arabidopsis thaliana
AT2G43140 0.5kb upstream 0.5kb upstream 500 false Chr2: 17935687-17936186 Arabidopsis thaliana
AT2G43140 0.5kb downstream 0.5kb downstream 4662 true Chr2: 17931025-17935686 Arabidopsis thaliana
AT2G43140 0.5kb downstream 0.5kb downstream 500 false Chr2: 17931025-17931524 Arabidopsis thaliana
AT2G43140 1.0kb upstream 1.0kb upstream 5162 true Chr2: 17931525-17936686 Arabidopsis thaliana
AT2G43140 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17935687-17936686 Arabidopsis thaliana
AT2G43140 1.0kb downstream 1.0kb downstream 5162 true Chr2: 17930525-17935686 Arabidopsis thaliana
AT2G43140 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17930525-17931524 Arabidopsis thaliana
AT2G43140 2.0kb upstream 2.0kb upstream 6162 true Chr2: 17931525-17937686 Arabidopsis thaliana
AT2G43140 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17935687-17937686 Arabidopsis thaliana
AT2G43140 2.0kb downstream 2.0kb downstream 6162 true Chr2: 17929525-17935686 Arabidopsis thaliana
AT2G43140 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17929525-17931524 Arabidopsis thaliana
AT2G43140 5.0kb upstream 5.0kb upstream 9162 true Chr2: 17931525-17940686 Arabidopsis thaliana
AT2G43140 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17935687-17940686 Arabidopsis thaliana
AT2G43140 5.0kb downstream 5.0kb downstream 9162 true Chr2: 17926525-17935686 Arabidopsis thaliana
AT2G43140 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17926525-17931524 Arabidopsis thaliana
AT2G43140 10.0kb upstream 10.0kb upstream 14162 true Chr2: 17931525-17945686 Arabidopsis thaliana
AT2G43140 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17935687-17945686 Arabidopsis thaliana
AT2G43140 10.0kb downstream 10.0kb downstream 14162 true Chr2: 17921525-17935686 Arabidopsis thaliana
AT2G43140 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17921525-17931524 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360711 5261 Brassicaceae View MSA
123798013 5264 Brassicales-Malvales View MSA
124295701 5266 SBM View MSA
124148071 5268 Malvidae View MSA
124061525 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.153     Low  
cufflinks 1.205        
cufflinks 0.029     Low Low
cufflinks 1.694       High
cufflinks 0.042     Low Low
cufflinks 0.871        

0 Strain