Gene : NAC042 A. thaliana TAIR10
Primary Identifier:  ? AT2G43000 Defline:  (1 of 1) PTHR31719//PTHR31719:SF5 - FAMILY NOT NAMED // NAC DOMAIN-CONTAINING PROTEIN 6-RELATED
Genomic Order:  3701 Name:  ? AT2G43000
Secondary Identifier:  ? PAC:19643442
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43000 0.5kb upstream 0.5kb upstream 2522 true Chr2: 17880615-17883136 Arabidopsis thaliana
AT2G43000 0.5kb upstream 0.5kb upstream 500 false Chr2: 17882637-17883136 Arabidopsis thaliana
AT2G43000 0.5kb downstream 0.5kb downstream 2522 true Chr2: 17880115-17882636 Arabidopsis thaliana
AT2G43000 0.5kb downstream 0.5kb downstream 500 false Chr2: 17880115-17880614 Arabidopsis thaliana
AT2G43000 1.0kb upstream 1.0kb upstream 3022 true Chr2: 17880615-17883636 Arabidopsis thaliana
AT2G43000 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17882637-17883636 Arabidopsis thaliana
AT2G43000 1.0kb downstream 1.0kb downstream 3022 true Chr2: 17879615-17882636 Arabidopsis thaliana
AT2G43000 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17879615-17880614 Arabidopsis thaliana
AT2G43000 2.0kb upstream 2.0kb upstream 4022 true Chr2: 17880615-17884636 Arabidopsis thaliana
AT2G43000 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17882637-17884636 Arabidopsis thaliana
AT2G43000 2.0kb downstream 2.0kb downstream 4022 true Chr2: 17878615-17882636 Arabidopsis thaliana
AT2G43000 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17878615-17880614 Arabidopsis thaliana
AT2G43000 5.0kb upstream 5.0kb upstream 7022 true Chr2: 17880615-17887636 Arabidopsis thaliana
AT2G43000 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17882637-17887636 Arabidopsis thaliana
AT2G43000 5.0kb downstream 5.0kb downstream 7022 true Chr2: 17875615-17882636 Arabidopsis thaliana
AT2G43000 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17875615-17880614 Arabidopsis thaliana
AT2G43000 10.0kb upstream 10.0kb upstream 12022 true Chr2: 17880615-17892636 Arabidopsis thaliana
AT2G43000 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17882637-17892636 Arabidopsis thaliana
AT2G43000 10.0kb downstream 10.0kb downstream 12022 true Chr2: 17870615-17882636 Arabidopsis thaliana
AT2G43000 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17870615-17880614 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041469 5273 Angiosperm View MSA
122371623 5261 Brassicaceae View MSA
123832565 5264 Brassicales-Malvales View MSA
124346564 5266 SBM View MSA
124248038 5268 Malvidae View MSA
124071210 5270 Rosid View MSA
123741758 5271 Pentapetalae View MSA
122786697 5272 Eudicot View MSA
121309853 5274 Embryophyte View MSA
123347498 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.441       High
cufflinks 0.36       Low
cufflinks 1.034        
cufflinks 2.347        
cufflinks 2.504        
cufflinks 0.618        

0 Strain