Gene : RPL16A A. thaliana TAIR10
Primary Identifier:  ? AT2G42740 Defline:  (1 of 4) K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)
Genomic Order:  3673 Name:  ? AT2G42740
Secondary Identifier:  ? PAC:19642402
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42740 0.5kb upstream 0.5kb upstream 1854 true Chr2: 17791229-17793082 Arabidopsis thaliana
AT2G42740 0.5kb upstream 0.5kb upstream 500 false Chr2: 17791229-17791728 Arabidopsis thaliana
AT2G42740 0.5kb downstream 0.5kb downstream 1854 true Chr2: 17791729-17793582 Arabidopsis thaliana
AT2G42740 0.5kb downstream 0.5kb downstream 500 false Chr2: 17793083-17793582 Arabidopsis thaliana
AT2G42740 1.0kb upstream 1.0kb upstream 2354 true Chr2: 17790729-17793082 Arabidopsis thaliana
AT2G42740 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17790729-17791728 Arabidopsis thaliana
AT2G42740 1.0kb downstream 1.0kb downstream 2354 true Chr2: 17791729-17794082 Arabidopsis thaliana
AT2G42740 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17793083-17794082 Arabidopsis thaliana
AT2G42740 2.0kb upstream 2.0kb upstream 3354 true Chr2: 17789729-17793082 Arabidopsis thaliana
AT2G42740 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17789729-17791728 Arabidopsis thaliana
AT2G42740 2.0kb downstream 2.0kb downstream 3354 true Chr2: 17791729-17795082 Arabidopsis thaliana
AT2G42740 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17793083-17795082 Arabidopsis thaliana
AT2G42740 5.0kb upstream 5.0kb upstream 6354 true Chr2: 17786729-17793082 Arabidopsis thaliana
AT2G42740 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17786729-17791728 Arabidopsis thaliana
AT2G42740 5.0kb downstream 5.0kb downstream 6354 true Chr2: 17791729-17798082 Arabidopsis thaliana
AT2G42740 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17793083-17798082 Arabidopsis thaliana
AT2G42740 10.0kb upstream 10.0kb upstream 11354 true Chr2: 17781729-17793082 Arabidopsis thaliana
AT2G42740 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17781729-17791728 Arabidopsis thaliana
AT2G42740 10.0kb downstream 10.0kb downstream 11354 true Chr2: 17791729-17803082 Arabidopsis thaliana
AT2G42740 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17793083-17803082 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381600 5261 Brassicaceae View MSA
123837006 5264 Brassicales-Malvales View MSA
124344079 5266 SBM View MSA
124253594 5268 Malvidae View MSA
124072174 5270 Rosid View MSA
123743053 5271 Pentapetalae View MSA
122795904 5272 Eudicot View MSA
122042572 5273 Angiosperm View MSA
121345121 5274 Embryophyte View MSA
123424367 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.382        
cufflinks 17.472        
cufflinks 8.282        
cufflinks 17.626        
cufflinks 6.158       Low
cufflinks 17.754        

0 Strain