Gene : AT2G42640 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23257//PTHR23257:SF435 - SERINE-THREONINE PROTEIN KINASE // MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE-LIKE PROTEIN Genomic Order:  3663
Name:  ? AT2G42640 Secondary Identifier:  ? PAC:19641530
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42640 0.5kb upstream 0.5kb upstream 6080 true Chr2: 17758532-17764611 Arabidopsis thaliana
AT2G42640 0.5kb upstream 0.5kb upstream 500 false Chr2: 17764112-17764611 Arabidopsis thaliana
AT2G42640 0.5kb downstream 0.5kb downstream 6080 true Chr2: 17758032-17764111 Arabidopsis thaliana
AT2G42640 0.5kb downstream 0.5kb downstream 500 false Chr2: 17758032-17758531 Arabidopsis thaliana
AT2G42640 1.0kb upstream 1.0kb upstream 6580 true Chr2: 17758532-17765111 Arabidopsis thaliana
AT2G42640 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17764112-17765111 Arabidopsis thaliana
AT2G42640 1.0kb downstream 1.0kb downstream 6580 true Chr2: 17757532-17764111 Arabidopsis thaliana
AT2G42640 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17757532-17758531 Arabidopsis thaliana
AT2G42640 2.0kb upstream 2.0kb upstream 7580 true Chr2: 17758532-17766111 Arabidopsis thaliana
AT2G42640 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17764112-17766111 Arabidopsis thaliana
AT2G42640 2.0kb downstream 2.0kb downstream 7580 true Chr2: 17756532-17764111 Arabidopsis thaliana
AT2G42640 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17756532-17758531 Arabidopsis thaliana
AT2G42640 5.0kb upstream 5.0kb upstream 10580 true Chr2: 17758532-17769111 Arabidopsis thaliana
AT2G42640 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17764112-17769111 Arabidopsis thaliana
AT2G42640 5.0kb downstream 5.0kb downstream 10580 true Chr2: 17753532-17764111 Arabidopsis thaliana
AT2G42640 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17753532-17758531 Arabidopsis thaliana
AT2G42640 10.0kb upstream 10.0kb upstream 15580 true Chr2: 17758532-17774111 Arabidopsis thaliana
AT2G42640 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17764112-17774111 Arabidopsis thaliana
AT2G42640 10.0kb downstream 10.0kb downstream 15580 true Chr2: 17748532-17764111 Arabidopsis thaliana
AT2G42640 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17748532-17758531 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343484 5261 Brassicaceae View MSA
123783668 5264 Brassicales-Malvales View MSA
124281889 5266 SBM View MSA
124136569 5268 Malvidae View MSA
123864409 5270 Rosid View MSA
123741333 5271 Pentapetalae View MSA
122770033 5272 Eudicot View MSA
122048343 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351351 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.983        
cufflinks 2.075        
cufflinks 0.955       Low
cufflinks 2.308       High
cufflinks 1.07        
cufflinks 1.763        

0 Strain