Gene : BZIP34 A. thaliana TAIR10
Primary Identifier:  ? AT2G42380 Defline:  (1 of 2) PTHR13301//PTHR13301:SF69 - X-BOX TRANSCRIPTION FACTOR-RELATED // BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN
Genomic Order:  3638 Name:  ? AT2G42380
Secondary Identifier:  ? PAC:19638740
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42380 0.5kb upstream 0.5kb upstream 2546 true Chr2: 17646900-17649445 Arabidopsis thaliana
AT2G42380 0.5kb upstream 0.5kb upstream 500 false Chr2: 17648946-17649445 Arabidopsis thaliana
AT2G42380 0.5kb downstream 0.5kb downstream 2546 true Chr2: 17646400-17648945 Arabidopsis thaliana
AT2G42380 0.5kb downstream 0.5kb downstream 500 false Chr2: 17646400-17646899 Arabidopsis thaliana
AT2G42380 1.0kb upstream 1.0kb upstream 3046 true Chr2: 17646900-17649945 Arabidopsis thaliana
AT2G42380 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17648946-17649945 Arabidopsis thaliana
AT2G42380 1.0kb downstream 1.0kb downstream 3046 true Chr2: 17645900-17648945 Arabidopsis thaliana
AT2G42380 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17645900-17646899 Arabidopsis thaliana
AT2G42380 2.0kb upstream 2.0kb upstream 4046 true Chr2: 17646900-17650945 Arabidopsis thaliana
AT2G42380 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17648946-17650945 Arabidopsis thaliana
AT2G42380 2.0kb downstream 2.0kb downstream 4046 true Chr2: 17644900-17648945 Arabidopsis thaliana
AT2G42380 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17644900-17646899 Arabidopsis thaliana
AT2G42380 5.0kb upstream 5.0kb upstream 7046 true Chr2: 17646900-17653945 Arabidopsis thaliana
AT2G42380 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17648946-17653945 Arabidopsis thaliana
AT2G42380 5.0kb downstream 5.0kb downstream 7046 true Chr2: 17641900-17648945 Arabidopsis thaliana
AT2G42380 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17641900-17646899 Arabidopsis thaliana
AT2G42380 10.0kb upstream 10.0kb upstream 12046 true Chr2: 17646900-17658945 Arabidopsis thaliana
AT2G42380 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17648946-17658945 Arabidopsis thaliana
AT2G42380 10.0kb downstream 10.0kb downstream 12046 true Chr2: 17636900-17648945 Arabidopsis thaliana
AT2G42380 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17636900-17646899 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377654 5261 Brassicaceae View MSA
123837238 5264 Brassicales-Malvales View MSA
124347537 5266 SBM View MSA
124249708 5268 Malvidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.079       High
cufflinks 0.181     Low Low
cufflinks 2.666        
cufflinks 0.293     Low  
cufflinks 1.878        
cufflinks 0.325     Low  

0 Strain