Gene : AT2G42320 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31344//PTHR31344:SF4 - FAMILY NOT NAMED // NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN Genomic Order:  3632
Name:  ? AT2G42320 Secondary Identifier:  ? PAC:19643366
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42320 0.5kb upstream 0.5kb upstream 3956 true Chr2: 17626842-17630797 Arabidopsis thaliana
AT2G42320 0.5kb upstream 0.5kb upstream 500 false Chr2: 17626842-17627341 Arabidopsis thaliana
AT2G42320 0.5kb downstream 0.5kb downstream 3956 true Chr2: 17627342-17631297 Arabidopsis thaliana
AT2G42320 0.5kb downstream 0.5kb downstream 500 false Chr2: 17630798-17631297 Arabidopsis thaliana
AT2G42320 1.0kb upstream 1.0kb upstream 4456 true Chr2: 17626342-17630797 Arabidopsis thaliana
AT2G42320 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17626342-17627341 Arabidopsis thaliana
AT2G42320 1.0kb downstream 1.0kb downstream 4456 true Chr2: 17627342-17631797 Arabidopsis thaliana
AT2G42320 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17630798-17631797 Arabidopsis thaliana
AT2G42320 2.0kb upstream 2.0kb upstream 5456 true Chr2: 17625342-17630797 Arabidopsis thaliana
AT2G42320 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17625342-17627341 Arabidopsis thaliana
AT2G42320 2.0kb downstream 2.0kb downstream 5456 true Chr2: 17627342-17632797 Arabidopsis thaliana
AT2G42320 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17630798-17632797 Arabidopsis thaliana
AT2G42320 5.0kb upstream 5.0kb upstream 8456 true Chr2: 17622342-17630797 Arabidopsis thaliana
AT2G42320 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17622342-17627341 Arabidopsis thaliana
AT2G42320 5.0kb downstream 5.0kb downstream 8456 true Chr2: 17627342-17635797 Arabidopsis thaliana
AT2G42320 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17630798-17635797 Arabidopsis thaliana
AT2G42320 10.0kb upstream 10.0kb upstream 13456 true Chr2: 17617342-17630797 Arabidopsis thaliana
AT2G42320 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17617342-17627341 Arabidopsis thaliana
AT2G42320 10.0kb downstream 10.0kb downstream 13456 true Chr2: 17627342-17640797 Arabidopsis thaliana
AT2G42320 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17630798-17640797 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370463 5261 Brassicaceae View MSA
123836588 5264 Brassicales-Malvales View MSA
124338356 5266 SBM View MSA
124240822 5268 Malvidae View MSA
124068078 5270 Rosid View MSA
123737150 5271 Pentapetalae View MSA
122789303 5272 Eudicot View MSA
122047501 5273 Angiosperm View MSA
121349213 5274 Embryophyte View MSA
123425563 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.078        
cufflinks 17.961        
cufflinks 7.781       Low
cufflinks 14.78        
cufflinks 8.13       Low
cufflinks 20.885       High

0 Strain