Gene : AT2G42310 A. thaliana TAIR10
Defline:  (1 of 2) PF10183 - ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) (ESSS) Genomic Order:  3631
Name:  ? AT2G42310 Secondary Identifier:  ? PAC:19642998
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3781 Arabidopsis thaliana pathologic  
Athaliana PWY-4302 Arabidopsis thaliana pathologic  
Athaliana PWY-5083 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42310 0.5kb upstream 0.5kb upstream 1178 true Chr2: 17624712-17625889 Arabidopsis thaliana
AT2G42310 0.5kb upstream 0.5kb upstream 500 false Chr2: 17624712-17625211 Arabidopsis thaliana
AT2G42310 0.5kb downstream 0.5kb downstream 1178 true Chr2: 17625212-17626389 Arabidopsis thaliana
AT2G42310 0.5kb downstream 0.5kb downstream 500 false Chr2: 17625890-17626389 Arabidopsis thaliana
AT2G42310 1.0kb upstream 1.0kb upstream 1678 true Chr2: 17624212-17625889 Arabidopsis thaliana
AT2G42310 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17624212-17625211 Arabidopsis thaliana
AT2G42310 1.0kb downstream 1.0kb downstream 1678 true Chr2: 17625212-17626889 Arabidopsis thaliana
AT2G42310 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17625890-17626889 Arabidopsis thaliana
AT2G42310 2.0kb upstream 2.0kb upstream 2678 true Chr2: 17623212-17625889 Arabidopsis thaliana
AT2G42310 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17623212-17625211 Arabidopsis thaliana
AT2G42310 2.0kb downstream 2.0kb downstream 2678 true Chr2: 17625212-17627889 Arabidopsis thaliana
AT2G42310 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17625890-17627889 Arabidopsis thaliana
AT2G42310 5.0kb upstream 5.0kb upstream 5678 true Chr2: 17620212-17625889 Arabidopsis thaliana
AT2G42310 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17620212-17625211 Arabidopsis thaliana
AT2G42310 5.0kb downstream 5.0kb downstream 5678 true Chr2: 17625212-17630889 Arabidopsis thaliana
AT2G42310 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17625890-17630889 Arabidopsis thaliana
AT2G42310 10.0kb upstream 10.0kb upstream 10678 true Chr2: 17615212-17625889 Arabidopsis thaliana
AT2G42310 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17615212-17625211 Arabidopsis thaliana
AT2G42310 10.0kb downstream 10.0kb downstream 10678 true Chr2: 17625212-17635889 Arabidopsis thaliana
AT2G42310 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17625890-17635889 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369748 5261 Brassicaceae View MSA
123840771 5264 Brassicales-Malvales View MSA
124322782 5266 SBM View MSA
124253115 5268 Malvidae View MSA
124061504 5270 Rosid View MSA
123740259 5271 Pentapetalae View MSA
122791906 5272 Eudicot View MSA
122042658 5273 Angiosperm View MSA
121346631 5274 Embryophyte View MSA
123428408 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 77.864     High  
cufflinks 156.136     High High
cufflinks 79.748     High  
cufflinks 136.53     High  
cufflinks 77.449     High  
cufflinks 125.959     High  

0 Strain