Gene : AT2G43690 A. thaliana TAIR10
Defline:  (1 of 38) PF00069//PF00139 - Protein kinase domain (Pkinase) // Legume lectin domain (Lectin_legB) Genomic Order:  3776
Name:  ? AT2G43690 Secondary Identifier:  ? PAC:19642480
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G43690 0.5kb upstream 0.5kb upstream 2495 true Chr2: 18112089-18114583 Arabidopsis thaliana
AT2G43690 0.5kb upstream 0.5kb upstream 500 false Chr2: 18112089-18112588 Arabidopsis thaliana
AT2G43690 0.5kb downstream 0.5kb downstream 2495 true Chr2: 18112589-18115083 Arabidopsis thaliana
AT2G43690 0.5kb downstream 0.5kb downstream 500 false Chr2: 18114584-18115083 Arabidopsis thaliana
AT2G43690 1.0kb upstream 1.0kb upstream 2995 true Chr2: 18111589-18114583 Arabidopsis thaliana
AT2G43690 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18111589-18112588 Arabidopsis thaliana
AT2G43690 1.0kb downstream 1.0kb downstream 2995 true Chr2: 18112589-18115583 Arabidopsis thaliana
AT2G43690 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18114584-18115583 Arabidopsis thaliana
AT2G43690 2.0kb upstream 2.0kb upstream 3995 true Chr2: 18110589-18114583 Arabidopsis thaliana
AT2G43690 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18110589-18112588 Arabidopsis thaliana
AT2G43690 2.0kb downstream 2.0kb downstream 3995 true Chr2: 18112589-18116583 Arabidopsis thaliana
AT2G43690 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18114584-18116583 Arabidopsis thaliana
AT2G43690 5.0kb upstream 5.0kb upstream 6995 true Chr2: 18107589-18114583 Arabidopsis thaliana
AT2G43690 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18107589-18112588 Arabidopsis thaliana
AT2G43690 5.0kb downstream 5.0kb downstream 6995 true Chr2: 18112589-18119583 Arabidopsis thaliana
AT2G43690 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18114584-18119583 Arabidopsis thaliana
AT2G43690 10.0kb upstream 10.0kb upstream 11995 true Chr2: 18102589-18114583 Arabidopsis thaliana
AT2G43690 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18102589-18112588 Arabidopsis thaliana
AT2G43690 10.0kb downstream 10.0kb downstream 11995 true Chr2: 18112589-18124583 Arabidopsis thaliana
AT2G43690 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18114584-18124583 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376897 5261 Brassicaceae View MSA
123840664 5264 Brassicales-Malvales View MSA
124322765 5266 SBM View MSA
124252273 5268 Malvidae View MSA
124050183 5270 Rosid View MSA
123746397 5271 Pentapetalae View MSA
122771896 5272 Eudicot View MSA
122049329 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.707       Low
cufflinks 1.547        
cufflinks 1.407        
cufflinks 1.576        
cufflinks 1.277        
cufflinks 1.22        

0 Strain