Gene : AT2G42000 A. thaliana TAIR10
Defline:  (1 of 2) PF02068 - Plant PEC family metallothionein (Metallothio_PEC) Genomic Order:  3601
Name:  ? AT2G42000 Secondary Identifier:  ? PAC:19641508
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42000 0.5kb upstream 0.5kb upstream 1701 true Chr2: 17529243-17530943 Arabidopsis thaliana
AT2G42000 0.5kb upstream 0.5kb upstream 500 false Chr2: 17530444-17530943 Arabidopsis thaliana
AT2G42000 0.5kb downstream 0.5kb downstream 1701 true Chr2: 17528743-17530443 Arabidopsis thaliana
AT2G42000 0.5kb downstream 0.5kb downstream 500 false Chr2: 17528743-17529242 Arabidopsis thaliana
AT2G42000 1.0kb upstream 1.0kb upstream 2201 true Chr2: 17529243-17531443 Arabidopsis thaliana
AT2G42000 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17530444-17531443 Arabidopsis thaliana
AT2G42000 1.0kb downstream 1.0kb downstream 2201 true Chr2: 17528243-17530443 Arabidopsis thaliana
AT2G42000 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17528243-17529242 Arabidopsis thaliana
AT2G42000 2.0kb upstream 2.0kb upstream 3201 true Chr2: 17529243-17532443 Arabidopsis thaliana
AT2G42000 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17530444-17532443 Arabidopsis thaliana
AT2G42000 2.0kb downstream 2.0kb downstream 3201 true Chr2: 17527243-17530443 Arabidopsis thaliana
AT2G42000 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17527243-17529242 Arabidopsis thaliana
AT2G42000 5.0kb upstream 5.0kb upstream 6201 true Chr2: 17529243-17535443 Arabidopsis thaliana
AT2G42000 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17530444-17535443 Arabidopsis thaliana
AT2G42000 5.0kb downstream 5.0kb downstream 6201 true Chr2: 17524243-17530443 Arabidopsis thaliana
AT2G42000 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17524243-17529242 Arabidopsis thaliana
AT2G42000 10.0kb upstream 10.0kb upstream 11201 true Chr2: 17529243-17540443 Arabidopsis thaliana
AT2G42000 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17530444-17540443 Arabidopsis thaliana
AT2G42000 10.0kb downstream 10.0kb downstream 11201 true Chr2: 17519243-17530443 Arabidopsis thaliana
AT2G42000 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17519243-17529242 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026261 5273 Angiosperm View MSA
122329442 5261 Brassicaceae Singleton cluster - no MSA
123770748 5264 Brassicales-Malvales Singleton cluster - no MSA
124269284 5266 SBM Singleton cluster - no MSA
124253689 5268 Malvidae View MSA
124050513 5270 Rosid View MSA
123739681 5271 Pentapetalae View MSA
122790496 5272 Eudicot View MSA
121296251 5274 Embryophyte View MSA
123334448 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain