Gene : VLN2 A. thaliana TAIR10
Primary Identifier:  ? AT2G41740 Defline:  (1 of 2) PTHR11977:SF46 - VILLIN-2-RELATED
Genomic Order:  3572 Name:  ? AT2G41740
Secondary Identifier:  ? PAC:19640011
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G41740 0.5kb upstream 0.5kb upstream 7526 true Chr2: 17410715-17418240 Arabidopsis thaliana
AT2G41740 0.5kb upstream 0.5kb upstream 500 false Chr2: 17417741-17418240 Arabidopsis thaliana
AT2G41740 0.5kb downstream 0.5kb downstream 7526 true Chr2: 17410215-17417740 Arabidopsis thaliana
AT2G41740 0.5kb downstream 0.5kb downstream 500 false Chr2: 17410215-17410714 Arabidopsis thaliana
AT2G41740 1.0kb upstream 1.0kb upstream 8026 true Chr2: 17410715-17418740 Arabidopsis thaliana
AT2G41740 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17417741-17418740 Arabidopsis thaliana
AT2G41740 1.0kb downstream 1.0kb downstream 8026 true Chr2: 17409715-17417740 Arabidopsis thaliana
AT2G41740 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17409715-17410714 Arabidopsis thaliana
AT2G41740 2.0kb upstream 2.0kb upstream 9026 true Chr2: 17410715-17419740 Arabidopsis thaliana
AT2G41740 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17417741-17419740 Arabidopsis thaliana
AT2G41740 2.0kb downstream 2.0kb downstream 9026 true Chr2: 17408715-17417740 Arabidopsis thaliana
AT2G41740 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17408715-17410714 Arabidopsis thaliana
AT2G41740 5.0kb upstream 5.0kb upstream 12026 true Chr2: 17410715-17422740 Arabidopsis thaliana
AT2G41740 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17417741-17422740 Arabidopsis thaliana
AT2G41740 5.0kb downstream 5.0kb downstream 12026 true Chr2: 17405715-17417740 Arabidopsis thaliana
AT2G41740 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17405715-17410714 Arabidopsis thaliana
AT2G41740 10.0kb upstream 10.0kb upstream 17026 true Chr2: 17410715-17427740 Arabidopsis thaliana
AT2G41740 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17417741-17427740 Arabidopsis thaliana
AT2G41740 10.0kb downstream 10.0kb downstream 17026 true Chr2: 17400715-17417740 Arabidopsis thaliana
AT2G41740 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17400715-17410714 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376275 5261 Brassicaceae View MSA
123835797 5264 Brassicales-Malvales View MSA
124336767 5266 SBM View MSA
124242323 5268 Malvidae View MSA
124073983 5270 Rosid View MSA
123746997 5271 Pentapetalae View MSA
122787653 5272 Eudicot View MSA
122045206 5273 Angiosperm View MSA
121349269 5274 Embryophyte View MSA
123428280 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.476        
cufflinks 21.161        
cufflinks 15.875        
cufflinks 21.663        
cufflinks 14.574       Low
cufflinks 28.567       High

0 Strain