Gene : AT2G41840 A. thaliana TAIR10
Defline:  (1 of 6) K02981 - small subunit ribosomal protein S2e (RP-S2e, RPS2) Genomic Order:  3583
Name:  ? AT2G41840 Secondary Identifier:  ? PAC:19638812
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G41840 0.5kb upstream 0.5kb upstream 2252 true Chr2: 17459788-17462039 Arabidopsis thaliana
AT2G41840 0.5kb upstream 0.5kb upstream 500 false Chr2: 17461540-17462039 Arabidopsis thaliana
AT2G41840 0.5kb downstream 0.5kb downstream 2252 true Chr2: 17459288-17461539 Arabidopsis thaliana
AT2G41840 0.5kb downstream 0.5kb downstream 500 false Chr2: 17459288-17459787 Arabidopsis thaliana
AT2G41840 1.0kb upstream 1.0kb upstream 2752 true Chr2: 17459788-17462539 Arabidopsis thaliana
AT2G41840 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17461540-17462539 Arabidopsis thaliana
AT2G41840 1.0kb downstream 1.0kb downstream 2752 true Chr2: 17458788-17461539 Arabidopsis thaliana
AT2G41840 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17458788-17459787 Arabidopsis thaliana
AT2G41840 2.0kb upstream 2.0kb upstream 3752 true Chr2: 17459788-17463539 Arabidopsis thaliana
AT2G41840 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17461540-17463539 Arabidopsis thaliana
AT2G41840 2.0kb downstream 2.0kb downstream 3752 true Chr2: 17457788-17461539 Arabidopsis thaliana
AT2G41840 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17457788-17459787 Arabidopsis thaliana
AT2G41840 5.0kb upstream 5.0kb upstream 6752 true Chr2: 17459788-17466539 Arabidopsis thaliana
AT2G41840 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17461540-17466539 Arabidopsis thaliana
AT2G41840 5.0kb downstream 5.0kb downstream 6752 true Chr2: 17454788-17461539 Arabidopsis thaliana
AT2G41840 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17454788-17459787 Arabidopsis thaliana
AT2G41840 10.0kb upstream 10.0kb upstream 11752 true Chr2: 17459788-17471539 Arabidopsis thaliana
AT2G41840 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17461540-17471539 Arabidopsis thaliana
AT2G41840 10.0kb downstream 10.0kb downstream 11752 true Chr2: 17449788-17461539 Arabidopsis thaliana
AT2G41840 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17449788-17459787 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380596 5261 Brassicaceae View MSA
123836722 5264 Brassicales-Malvales View MSA
124337985 5266 SBM View MSA
124250272 5268 Malvidae View MSA
124064962 5270 Rosid View MSA
123747493 5271 Pentapetalae View MSA
122787433 5272 Eudicot View MSA
122047189 5273 Angiosperm View MSA
121344542 5274 Embryophyte View MSA
123424194 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 203.451     High  
cufflinks 384.5     High  
cufflinks 189.873     High  
cufflinks 392.417     High  
cufflinks 169.15     High Low
cufflinks 403.795     High  

0 Strain