Gene : AT2G41620 A. thaliana TAIR10
Defline:  (1 of 2) K14309 - nuclear pore complex protein Nup93 (NUP93, NIC96) Genomic Order:  3559
Name:  ? AT2G41620 Secondary Identifier:  ? PAC:19642096
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G41620 0.5kb upstream 0.5kb upstream 8281 true Chr2: 17347304-17355584 Arabidopsis thaliana
AT2G41620 0.5kb upstream 0.5kb upstream 500 false Chr2: 17355085-17355584 Arabidopsis thaliana
AT2G41620 0.5kb downstream 0.5kb downstream 8281 true Chr2: 17346804-17355084 Arabidopsis thaliana
AT2G41620 0.5kb downstream 0.5kb downstream 500 false Chr2: 17346804-17347303 Arabidopsis thaliana
AT2G41620 1.0kb upstream 1.0kb upstream 8781 true Chr2: 17347304-17356084 Arabidopsis thaliana
AT2G41620 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17355085-17356084 Arabidopsis thaliana
AT2G41620 1.0kb downstream 1.0kb downstream 8781 true Chr2: 17346304-17355084 Arabidopsis thaliana
AT2G41620 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17346304-17347303 Arabidopsis thaliana
AT2G41620 2.0kb upstream 2.0kb upstream 9781 true Chr2: 17347304-17357084 Arabidopsis thaliana
AT2G41620 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17355085-17357084 Arabidopsis thaliana
AT2G41620 2.0kb downstream 2.0kb downstream 9781 true Chr2: 17345304-17355084 Arabidopsis thaliana
AT2G41620 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17345304-17347303 Arabidopsis thaliana
AT2G41620 5.0kb upstream 5.0kb upstream 12781 true Chr2: 17347304-17360084 Arabidopsis thaliana
AT2G41620 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17355085-17360084 Arabidopsis thaliana
AT2G41620 5.0kb downstream 5.0kb downstream 12781 true Chr2: 17342304-17355084 Arabidopsis thaliana
AT2G41620 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17342304-17347303 Arabidopsis thaliana
AT2G41620 10.0kb upstream 10.0kb upstream 17781 true Chr2: 17347304-17365084 Arabidopsis thaliana
AT2G41620 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17355085-17365084 Arabidopsis thaliana
AT2G41620 10.0kb downstream 10.0kb downstream 17781 true Chr2: 17337304-17355084 Arabidopsis thaliana
AT2G41620 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17337304-17347303 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362600 5261 Brassicaceae View MSA
123833413 5264 Brassicales-Malvales View MSA
124345485 5266 SBM View MSA
124240166 5268 Malvidae View MSA
124073595 5270 Rosid View MSA
123740371 5271 Pentapetalae View MSA
122788822 5272 Eudicot View MSA
122043795 5273 Angiosperm View MSA
121346539 5274 Embryophyte View MSA
123424897 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.586        
cufflinks 13.307       High
cufflinks 6.321        
cufflinks 12.847        
cufflinks 6.54        
cufflinks 11.772        

0 Strain