Gene : LBD18 A. thaliana TAIR10
Primary Identifier:  ? AT2G45420 Defline:  (1 of 2) PTHR31529//PTHR31529:SF3 - FAMILY NOT NAMED // LOB DOMAIN-CONTAINING PROTEIN 18-RELATED
Genomic Order:  3960 Name:  ? AT2G45420
Secondary Identifier:  ? PAC:19642716
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G45420 0.5kb upstream 0.5kb upstream 2882 true Chr2: 18717848-18720729 Arabidopsis thaliana
AT2G45420 0.5kb upstream 0.5kb upstream 500 false Chr2: 18717848-18718347 Arabidopsis thaliana
AT2G45420 0.5kb downstream 0.5kb downstream 2882 true Chr2: 18718348-18721229 Arabidopsis thaliana
AT2G45420 0.5kb downstream 0.5kb downstream 500 false Chr2: 18720730-18721229 Arabidopsis thaliana
AT2G45420 1.0kb upstream 1.0kb upstream 3382 true Chr2: 18717348-18720729 Arabidopsis thaliana
AT2G45420 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18717348-18718347 Arabidopsis thaliana
AT2G45420 1.0kb downstream 1.0kb downstream 3382 true Chr2: 18718348-18721729 Arabidopsis thaliana
AT2G45420 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18720730-18721729 Arabidopsis thaliana
AT2G45420 2.0kb upstream 2.0kb upstream 4382 true Chr2: 18716348-18720729 Arabidopsis thaliana
AT2G45420 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18716348-18718347 Arabidopsis thaliana
AT2G45420 2.0kb downstream 2.0kb downstream 4382 true Chr2: 18718348-18722729 Arabidopsis thaliana
AT2G45420 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18720730-18722729 Arabidopsis thaliana
AT2G45420 5.0kb upstream 5.0kb upstream 7382 true Chr2: 18713348-18720729 Arabidopsis thaliana
AT2G45420 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18713348-18718347 Arabidopsis thaliana
AT2G45420 5.0kb downstream 5.0kb downstream 7382 true Chr2: 18718348-18725729 Arabidopsis thaliana
AT2G45420 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18720730-18725729 Arabidopsis thaliana
AT2G45420 10.0kb upstream 10.0kb upstream 12382 true Chr2: 18708348-18720729 Arabidopsis thaliana
AT2G45420 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18708348-18718347 Arabidopsis thaliana
AT2G45420 10.0kb downstream 10.0kb downstream 12382 true Chr2: 18718348-18730729 Arabidopsis thaliana
AT2G45420 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18720730-18730729 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378641 5261 Brassicaceae View MSA
123835040 5264 Brassicales-Malvales View MSA
124342816 5266 SBM View MSA
124253625 5268 Malvidae View MSA
124061672 5270 Rosid View MSA
123743730 5271 Pentapetalae View MSA
122791907 5272 Eudicot View MSA
122045879 5273 Angiosperm View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.042     Low Low
cufflinks 0.158     Low  
cufflinks 0.042     Low Low
cufflinks 0.416       High
cufflinks 0.073     Low  
cufflinks 0.286     Low  

0 Strain