Gene : AT2G36885 A. thaliana TAIR10
Defline:  (1 of 1) PTHR36738:SF1 - EXPRESSED PROTEIN Genomic Order:  3042
Name:  ? AT2G36885 Secondary Identifier:  ? PAC:19642373
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G36885 0.5kb upstream 0.5kb upstream 2209 true Chr2: 15482003-15484211 Arabidopsis thaliana
AT2G36885 0.5kb upstream 0.5kb upstream 500 false Chr2: 15483712-15484211 Arabidopsis thaliana
AT2G36885 0.5kb downstream 0.5kb downstream 2209 true Chr2: 15481503-15483711 Arabidopsis thaliana
AT2G36885 0.5kb downstream 0.5kb downstream 500 false Chr2: 15481503-15482002 Arabidopsis thaliana
AT2G36885 1.0kb upstream 1.0kb upstream 2709 true Chr2: 15482003-15484711 Arabidopsis thaliana
AT2G36885 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15483712-15484711 Arabidopsis thaliana
AT2G36885 1.0kb downstream 1.0kb downstream 2709 true Chr2: 15481003-15483711 Arabidopsis thaliana
AT2G36885 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15481003-15482002 Arabidopsis thaliana
AT2G36885 2.0kb upstream 2.0kb upstream 3709 true Chr2: 15482003-15485711 Arabidopsis thaliana
AT2G36885 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15483712-15485711 Arabidopsis thaliana
AT2G36885 2.0kb downstream 2.0kb downstream 3709 true Chr2: 15480003-15483711 Arabidopsis thaliana
AT2G36885 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15480003-15482002 Arabidopsis thaliana
AT2G36885 5.0kb upstream 5.0kb upstream 6709 true Chr2: 15482003-15488711 Arabidopsis thaliana
AT2G36885 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15483712-15488711 Arabidopsis thaliana
AT2G36885 5.0kb downstream 5.0kb downstream 6709 true Chr2: 15477003-15483711 Arabidopsis thaliana
AT2G36885 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15477003-15482002 Arabidopsis thaliana
AT2G36885 10.0kb upstream 10.0kb upstream 11709 true Chr2: 15482003-15493711 Arabidopsis thaliana
AT2G36885 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15483712-15493711 Arabidopsis thaliana
AT2G36885 10.0kb downstream 10.0kb downstream 11709 true Chr2: 15472003-15483711 Arabidopsis thaliana
AT2G36885 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15472003-15482002 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041422 5273 Angiosperm View MSA
122375069 5261 Brassicaceae View MSA
123829272 5264 Brassicales-Malvales View MSA
124345586 5266 SBM View MSA
124237486 5268 Malvidae View MSA
124061850 5270 Rosid View MSA
123751922 5271 Pentapetalae View MSA
122793004 5272 Eudicot View MSA
121347775 5274 Embryophyte View MSA
123423846 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.137        
cufflinks 3.865        
cufflinks 7.735       High
cufflinks 3.808        
cufflinks 5.207        
cufflinks 3.943        

0 Strain