Gene : AT2G01080 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31234//PTHR31234:SF8 - FAMILY NOT NAMED // EXPRESSED PROTEIN Genomic Order:  7
Name:  ? AT2G01080 Secondary Identifier:  ? PAC:19639666
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01080 0.5kb upstream 0.5kb upstream 1947 true Chr2: 77388-79334 Arabidopsis thaliana
AT2G01080 0.5kb upstream 0.5kb upstream 500 false Chr2: 77388-77887 Arabidopsis thaliana
AT2G01080 0.5kb downstream 0.5kb downstream 1947 true Chr2: 77888-79834 Arabidopsis thaliana
AT2G01080 0.5kb downstream 0.5kb downstream 500 false Chr2: 79335-79834 Arabidopsis thaliana
AT2G01080 1.0kb upstream 1.0kb upstream 2447 true Chr2: 76888-79334 Arabidopsis thaliana
AT2G01080 1.0kb upstream 1.0kb upstream 1000 false Chr2: 76888-77887 Arabidopsis thaliana
AT2G01080 1.0kb downstream 1.0kb downstream 2447 true Chr2: 77888-80334 Arabidopsis thaliana
AT2G01080 1.0kb downstream 1.0kb downstream 1000 false Chr2: 79335-80334 Arabidopsis thaliana
AT2G01080 2.0kb upstream 2.0kb upstream 3447 true Chr2: 75888-79334 Arabidopsis thaliana
AT2G01080 2.0kb upstream 2.0kb upstream 2000 false Chr2: 75888-77887 Arabidopsis thaliana
AT2G01080 2.0kb downstream 2.0kb downstream 3447 true Chr2: 77888-81334 Arabidopsis thaliana
AT2G01080 2.0kb downstream 2.0kb downstream 2000 false Chr2: 79335-81334 Arabidopsis thaliana
AT2G01080 5.0kb upstream 5.0kb upstream 6447 true Chr2: 72888-79334 Arabidopsis thaliana
AT2G01080 5.0kb upstream 5.0kb upstream 5000 false Chr2: 72888-77887 Arabidopsis thaliana
AT2G01080 5.0kb downstream 5.0kb downstream 6447 true Chr2: 77888-84334 Arabidopsis thaliana
AT2G01080 5.0kb downstream 5.0kb downstream 5000 false Chr2: 79335-84334 Arabidopsis thaliana
AT2G01080 10.0kb upstream 10.0kb upstream 11447 true Chr2: 67888-79334 Arabidopsis thaliana
AT2G01080 10.0kb upstream 10.0kb upstream 10000 false Chr2: 67888-77887 Arabidopsis thaliana
AT2G01080 10.0kb downstream 10.0kb downstream 11447 true Chr2: 77888-89334 Arabidopsis thaliana
AT2G01080 10.0kb downstream 10.0kb downstream 10000 false Chr2: 79335-89334 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375025 5261 Brassicaceae View MSA
123833039 5264 Brassicales-Malvales View MSA
124342716 5266 SBM View MSA
124243213 5268 Malvidae View MSA
124067884 5270 Rosid View MSA
123745093 5271 Pentapetalae View MSA
122786322 5272 Eudicot View MSA
122042792 5273 Angiosperm View MSA
121350996 5274 Embryophyte View MSA
123381963 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.214       Low
cufflinks 20.975       High
cufflinks 4.747        
cufflinks 16.25        
cufflinks 4.823        
cufflinks 15.253        

0 Strain