Gene : AT2G01220 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31285:SF0 - PROMOTER OF FILAMENTATION PROTEIN 1 Genomic Order:  21
Name:  ? AT2G01220 Secondary Identifier:  ? PAC:19639439
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01220 0.5kb upstream 0.5kb upstream 3691 true Chr2: 122776-126466 Arabidopsis thaliana
AT2G01220 0.5kb upstream 0.5kb upstream 500 false Chr2: 122776-123275 Arabidopsis thaliana
AT2G01220 0.5kb downstream 0.5kb downstream 3691 true Chr2: 123276-126966 Arabidopsis thaliana
AT2G01220 0.5kb downstream 0.5kb downstream 500 false Chr2: 126467-126966 Arabidopsis thaliana
AT2G01220 1.0kb upstream 1.0kb upstream 4191 true Chr2: 122276-126466 Arabidopsis thaliana
AT2G01220 1.0kb upstream 1.0kb upstream 1000 false Chr2: 122276-123275 Arabidopsis thaliana
AT2G01220 1.0kb downstream 1.0kb downstream 4191 true Chr2: 123276-127466 Arabidopsis thaliana
AT2G01220 1.0kb downstream 1.0kb downstream 1000 false Chr2: 126467-127466 Arabidopsis thaliana
AT2G01220 2.0kb upstream 2.0kb upstream 5191 true Chr2: 121276-126466 Arabidopsis thaliana
AT2G01220 2.0kb upstream 2.0kb upstream 2000 false Chr2: 121276-123275 Arabidopsis thaliana
AT2G01220 2.0kb downstream 2.0kb downstream 5191 true Chr2: 123276-128466 Arabidopsis thaliana
AT2G01220 2.0kb downstream 2.0kb downstream 2000 false Chr2: 126467-128466 Arabidopsis thaliana
AT2G01220 5.0kb upstream 5.0kb upstream 8191 true Chr2: 118276-126466 Arabidopsis thaliana
AT2G01220 5.0kb upstream 5.0kb upstream 5000 false Chr2: 118276-123275 Arabidopsis thaliana
AT2G01220 5.0kb downstream 5.0kb downstream 8191 true Chr2: 123276-131466 Arabidopsis thaliana
AT2G01220 5.0kb downstream 5.0kb downstream 5000 false Chr2: 126467-131466 Arabidopsis thaliana
AT2G01220 10.0kb upstream 10.0kb upstream 13191 true Chr2: 113276-126466 Arabidopsis thaliana
AT2G01220 10.0kb upstream 10.0kb upstream 10000 false Chr2: 113276-123275 Arabidopsis thaliana
AT2G01220 10.0kb downstream 10.0kb downstream 13191 true Chr2: 123276-136466 Arabidopsis thaliana
AT2G01220 10.0kb downstream 10.0kb downstream 10000 false Chr2: 126467-136466 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370163 5261 Brassicaceae View MSA
123830198 5264 Brassicales-Malvales View MSA
124346526 5266 SBM View MSA
124243037 5268 Malvidae View MSA
124066208 5270 Rosid View MSA
123737916 5271 Pentapetalae View MSA
122789184 5272 Eudicot View MSA
122047029 5273 Angiosperm View MSA
121345024 5274 Embryophyte View MSA
123425109 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.82        
cufflinks 7.841        
cufflinks 5.702        
cufflinks 8.129       High
cufflinks 5.771        
cufflinks 7.328        

0 Strain