Gene : AT2G46160 A. thaliana TAIR10
Defline:  (1 of 2) PTHR14155:SF71 - RING-H2 FINGER PROTEIN ATL67-RELATED Genomic Order:  4033
Name:  ? AT2G46160 Secondary Identifier:  ? PAC:19641327
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46160 0.5kb upstream 0.5kb upstream 1303 true Chr2: 18962583-18963885 Arabidopsis thaliana
AT2G46160 0.5kb upstream 0.5kb upstream 500 false Chr2: 18962583-18963082 Arabidopsis thaliana
AT2G46160 0.5kb downstream 0.5kb downstream 1303 true Chr2: 18963083-18964385 Arabidopsis thaliana
AT2G46160 0.5kb downstream 0.5kb downstream 500 false Chr2: 18963886-18964385 Arabidopsis thaliana
AT2G46160 1.0kb upstream 1.0kb upstream 1803 true Chr2: 18962083-18963885 Arabidopsis thaliana
AT2G46160 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18962083-18963082 Arabidopsis thaliana
AT2G46160 1.0kb downstream 1.0kb downstream 1803 true Chr2: 18963083-18964885 Arabidopsis thaliana
AT2G46160 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18963886-18964885 Arabidopsis thaliana
AT2G46160 2.0kb upstream 2.0kb upstream 2803 true Chr2: 18961083-18963885 Arabidopsis thaliana
AT2G46160 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18961083-18963082 Arabidopsis thaliana
AT2G46160 2.0kb downstream 2.0kb downstream 2803 true Chr2: 18963083-18965885 Arabidopsis thaliana
AT2G46160 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18963886-18965885 Arabidopsis thaliana
AT2G46160 5.0kb upstream 5.0kb upstream 5803 true Chr2: 18958083-18963885 Arabidopsis thaliana
AT2G46160 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18958083-18963082 Arabidopsis thaliana
AT2G46160 5.0kb downstream 5.0kb downstream 5803 true Chr2: 18963083-18968885 Arabidopsis thaliana
AT2G46160 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18963886-18968885 Arabidopsis thaliana
AT2G46160 10.0kb upstream 10.0kb upstream 10803 true Chr2: 18953083-18963885 Arabidopsis thaliana
AT2G46160 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18953083-18963082 Arabidopsis thaliana
AT2G46160 10.0kb downstream 10.0kb downstream 10803 true Chr2: 18963083-18973885 Arabidopsis thaliana
AT2G46160 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18963886-18973885 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377349 5261 Brassicaceae View MSA
123840964 5264 Brassicales-Malvales View MSA
124322810 5266 SBM View MSA
124250731 5268 Malvidae View MSA
124062741 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.82       High
cufflinks 0.847       Low
cufflinks 1.09        
cufflinks 1.27        
cufflinks 1.069        
cufflinks 0.926        

0 Strain