Gene : AT2G05510 A. thaliana TAIR10
Defline:  (1 of 6) PF07172 - Glycine rich protein family (GRP) Genomic Order:  415
Name:  ? AT2G05510 Secondary Identifier:  ? PAC:19638407
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G05510 0.5kb upstream 0.5kb upstream 1544 true Chr2: 2015206-2016749 Arabidopsis thaliana
AT2G05510 0.5kb upstream 0.5kb upstream 500 false Chr2: 2015206-2015705 Arabidopsis thaliana
AT2G05510 0.5kb downstream 0.5kb downstream 1544 true Chr2: 2015706-2017249 Arabidopsis thaliana
AT2G05510 0.5kb downstream 0.5kb downstream 500 false Chr2: 2016750-2017249 Arabidopsis thaliana
AT2G05510 1.0kb upstream 1.0kb upstream 2044 true Chr2: 2014706-2016749 Arabidopsis thaliana
AT2G05510 1.0kb upstream 1.0kb upstream 1000 false Chr2: 2014706-2015705 Arabidopsis thaliana
AT2G05510 1.0kb downstream 1.0kb downstream 2044 true Chr2: 2015706-2017749 Arabidopsis thaliana
AT2G05510 1.0kb downstream 1.0kb downstream 1000 false Chr2: 2016750-2017749 Arabidopsis thaliana
AT2G05510 2.0kb upstream 2.0kb upstream 3044 true Chr2: 2013706-2016749 Arabidopsis thaliana
AT2G05510 2.0kb upstream 2.0kb upstream 2000 false Chr2: 2013706-2015705 Arabidopsis thaliana
AT2G05510 2.0kb downstream 2.0kb downstream 3044 true Chr2: 2015706-2018749 Arabidopsis thaliana
AT2G05510 2.0kb downstream 2.0kb downstream 2000 false Chr2: 2016750-2018749 Arabidopsis thaliana
AT2G05510 5.0kb upstream 5.0kb upstream 6044 true Chr2: 2010706-2016749 Arabidopsis thaliana
AT2G05510 5.0kb upstream 5.0kb upstream 5000 false Chr2: 2010706-2015705 Arabidopsis thaliana
AT2G05510 5.0kb downstream 5.0kb downstream 6044 true Chr2: 2015706-2021749 Arabidopsis thaliana
AT2G05510 5.0kb downstream 5.0kb downstream 5000 false Chr2: 2016750-2021749 Arabidopsis thaliana
AT2G05510 10.0kb upstream 10.0kb upstream 11044 true Chr2: 2005706-2016749 Arabidopsis thaliana
AT2G05510 10.0kb upstream 10.0kb upstream 10000 false Chr2: 2005706-2015705 Arabidopsis thaliana
AT2G05510 10.0kb downstream 10.0kb downstream 11044 true Chr2: 2015706-2026749 Arabidopsis thaliana
AT2G05510 10.0kb downstream 10.0kb downstream 10000 false Chr2: 2016750-2026749 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381030 5261 Brassicaceae View MSA
123803024 5264 Brassicales-Malvales View MSA
124300166 5266 SBM View MSA
124151417 5268 Malvidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low Low
cufflinks 13.557        
cufflinks 0.015     Low Low
cufflinks 41.619     High High
cufflinks 0.057     Low  
cufflinks 8.561        

0 Strain