Gene : AT2G28710 A. thaliana TAIR10
Defline:  (1 of 43) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  2163
Name:  ? AT2G28710 Secondary Identifier:  ? PAC:19639328
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G28710 0.5kb upstream 0.5kb upstream 1699 true Chr2: 12321886-12323584 Arabidopsis thaliana
AT2G28710 0.5kb upstream 0.5kb upstream 500 false Chr2: 12321886-12322385 Arabidopsis thaliana
AT2G28710 0.5kb downstream 0.5kb downstream 1699 true Chr2: 12322386-12324084 Arabidopsis thaliana
AT2G28710 0.5kb downstream 0.5kb downstream 500 false Chr2: 12323585-12324084 Arabidopsis thaliana
AT2G28710 1.0kb upstream 1.0kb upstream 2199 true Chr2: 12321386-12323584 Arabidopsis thaliana
AT2G28710 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12321386-12322385 Arabidopsis thaliana
AT2G28710 1.0kb downstream 1.0kb downstream 2199 true Chr2: 12322386-12324584 Arabidopsis thaliana
AT2G28710 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12323585-12324584 Arabidopsis thaliana
AT2G28710 2.0kb upstream 2.0kb upstream 3199 true Chr2: 12320386-12323584 Arabidopsis thaliana
AT2G28710 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12320386-12322385 Arabidopsis thaliana
AT2G28710 2.0kb downstream 2.0kb downstream 3199 true Chr2: 12322386-12325584 Arabidopsis thaliana
AT2G28710 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12323585-12325584 Arabidopsis thaliana
AT2G28710 5.0kb upstream 5.0kb upstream 6199 true Chr2: 12317386-12323584 Arabidopsis thaliana
AT2G28710 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12317386-12322385 Arabidopsis thaliana
AT2G28710 5.0kb downstream 5.0kb downstream 6199 true Chr2: 12322386-12328584 Arabidopsis thaliana
AT2G28710 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12323585-12328584 Arabidopsis thaliana
AT2G28710 10.0kb upstream 10.0kb upstream 11199 true Chr2: 12312386-12323584 Arabidopsis thaliana
AT2G28710 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12312386-12322385 Arabidopsis thaliana
AT2G28710 10.0kb downstream 10.0kb downstream 11199 true Chr2: 12322386-12333584 Arabidopsis thaliana
AT2G28710 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12323585-12333584 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363816 5261 Brassicaceae View MSA
123838776 5264 Brassicales-Malvales View MSA
124351487 5266 SBM View MSA
124250734 5268 Malvidae View MSA
124071249 5270 Rosid View MSA
123747694 5271 Pentapetalae View MSA
122796352 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.14       High
cufflinks 0.114     Low Low
cufflinks 0.765        
cufflinks 0.148     Low Low
cufflinks 1.232        
cufflinks 0.549        

0 Strain