Gene : EPF1 A. thaliana TAIR10
Primary Identifier:  ? AT2G20875 Defline:  epidermal patterning factor 1
Genomic Order:  1344 Name:  ? AT2G20875
Secondary Identifier:  ? PAC:19641929
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G20875 0.5kb upstream 0.5kb upstream 1039 true Chr2: 8983074-8984112 Arabidopsis thaliana
AT2G20875 0.5kb upstream 0.5kb upstream 500 false Chr2: 8983613-8984112 Arabidopsis thaliana
AT2G20875 0.5kb downstream 0.5kb downstream 1039 true Chr2: 8982574-8983612 Arabidopsis thaliana
AT2G20875 0.5kb downstream 0.5kb downstream 500 false Chr2: 8982574-8983073 Arabidopsis thaliana
AT2G20875 1.0kb upstream 1.0kb upstream 1539 true Chr2: 8983074-8984612 Arabidopsis thaliana
AT2G20875 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8983613-8984612 Arabidopsis thaliana
AT2G20875 1.0kb downstream 1.0kb downstream 1539 true Chr2: 8982074-8983612 Arabidopsis thaliana
AT2G20875 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8982074-8983073 Arabidopsis thaliana
AT2G20875 2.0kb upstream 2.0kb upstream 2539 true Chr2: 8983074-8985612 Arabidopsis thaliana
AT2G20875 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8983613-8985612 Arabidopsis thaliana
AT2G20875 2.0kb downstream 2.0kb downstream 2539 true Chr2: 8981074-8983612 Arabidopsis thaliana
AT2G20875 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8981074-8983073 Arabidopsis thaliana
AT2G20875 5.0kb upstream 5.0kb upstream 5539 true Chr2: 8983074-8988612 Arabidopsis thaliana
AT2G20875 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8983613-8988612 Arabidopsis thaliana
AT2G20875 5.0kb downstream 5.0kb downstream 5539 true Chr2: 8978074-8983612 Arabidopsis thaliana
AT2G20875 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8978074-8983073 Arabidopsis thaliana
AT2G20875 10.0kb upstream 10.0kb upstream 10539 true Chr2: 8983074-8993612 Arabidopsis thaliana
AT2G20875 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8983613-8993612 Arabidopsis thaliana
AT2G20875 10.0kb downstream 10.0kb downstream 10539 true Chr2: 8973074-8983612 Arabidopsis thaliana
AT2G20875 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8973074-8983073 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365613 5261 Brassicaceae View MSA
123798996 5264 Brassicales-Malvales View MSA
124348550 5266 SBM View MSA
124244660 5268 Malvidae View MSA
124066139 5270 Rosid View MSA
123748045 5271 Pentapetalae View MSA
122792387 5272 Eudicot View MSA
122049179 5273 Angiosperm View MSA
121350118 5274 Embryophyte View MSA
123381585 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.907       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.759        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.63        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain