Gene : AT2G47830 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11562:SF18 - MITOCHONDRIAL METAL TRANSPORTER 1-RELATED Genomic Order:  4211
Name:  ? AT2G47830 Secondary Identifier:  ? PAC:19640088
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47830 0.5kb upstream 0.5kb upstream 3659 true Chr2: 19590856-19594514 Arabidopsis thaliana
AT2G47830 0.5kb upstream 0.5kb upstream 500 false Chr2: 19594015-19594514 Arabidopsis thaliana
AT2G47830 0.5kb downstream 0.5kb downstream 3659 true Chr2: 19590356-19594014 Arabidopsis thaliana
AT2G47830 0.5kb downstream 0.5kb downstream 500 false Chr2: 19590356-19590855 Arabidopsis thaliana
AT2G47830 1.0kb upstream 1.0kb upstream 4159 true Chr2: 19590856-19595014 Arabidopsis thaliana
AT2G47830 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19594015-19595014 Arabidopsis thaliana
AT2G47830 1.0kb downstream 1.0kb downstream 4159 true Chr2: 19589856-19594014 Arabidopsis thaliana
AT2G47830 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19589856-19590855 Arabidopsis thaliana
AT2G47830 2.0kb upstream 2.0kb upstream 5159 true Chr2: 19590856-19596014 Arabidopsis thaliana
AT2G47830 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19594015-19596014 Arabidopsis thaliana
AT2G47830 2.0kb downstream 2.0kb downstream 5159 true Chr2: 19588856-19594014 Arabidopsis thaliana
AT2G47830 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19588856-19590855 Arabidopsis thaliana
AT2G47830 5.0kb upstream 5.0kb upstream 8159 true Chr2: 19590856-19599014 Arabidopsis thaliana
AT2G47830 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19594015-19599014 Arabidopsis thaliana
AT2G47830 5.0kb downstream 5.0kb downstream 8159 true Chr2: 19585856-19594014 Arabidopsis thaliana
AT2G47830 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19585856-19590855 Arabidopsis thaliana
AT2G47830 10.0kb upstream 10.0kb upstream 13159 true Chr2: 19590856-19604014 Arabidopsis thaliana
AT2G47830 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19594015-19604014 Arabidopsis thaliana
AT2G47830 10.0kb downstream 10.0kb downstream 13159 true Chr2: 19580856-19594014 Arabidopsis thaliana
AT2G47830 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19580856-19590855 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372021 5261 Brassicaceae View MSA
123828617 5264 Brassicales-Malvales View MSA
124344694 5266 SBM View MSA
124238143 5268 Malvidae View MSA
124066405 5270 Rosid View MSA
123750675 5271 Pentapetalae View MSA
122789072 5272 Eudicot View MSA
122043997 5273 Angiosperm View MSA
121348915 5274 Embryophyte View MSA
123425437 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.827        
cufflinks 6.593       High
cufflinks 2.639        
cufflinks 5.712        
cufflinks 2.71        
cufflinks 5.264        

0 Strain