Gene : BOR1 A. thaliana TAIR10
Primary Identifier:  ? AT2G47160 Defline:  (1 of 3) PTHR11453:SF44 - BORON TRANSPORTER 1-RELATED
Genomic Order:  4145 Name:  ? AT2G47160
Secondary Identifier:  ? PAC:19639911
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47160 0.5kb upstream 0.5kb upstream 4170 true Chr2: 19357478-19361647 Arabidopsis thaliana
AT2G47160 0.5kb upstream 0.5kb upstream 500 false Chr2: 19361148-19361647 Arabidopsis thaliana
AT2G47160 0.5kb downstream 0.5kb downstream 4170 true Chr2: 19356978-19361147 Arabidopsis thaliana
AT2G47160 0.5kb downstream 0.5kb downstream 500 false Chr2: 19356978-19357477 Arabidopsis thaliana
AT2G47160 1.0kb upstream 1.0kb upstream 4670 true Chr2: 19357478-19362147 Arabidopsis thaliana
AT2G47160 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19361148-19362147 Arabidopsis thaliana
AT2G47160 1.0kb downstream 1.0kb downstream 4670 true Chr2: 19356478-19361147 Arabidopsis thaliana
AT2G47160 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19356478-19357477 Arabidopsis thaliana
AT2G47160 2.0kb upstream 2.0kb upstream 5670 true Chr2: 19357478-19363147 Arabidopsis thaliana
AT2G47160 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19361148-19363147 Arabidopsis thaliana
AT2G47160 2.0kb downstream 2.0kb downstream 5670 true Chr2: 19355478-19361147 Arabidopsis thaliana
AT2G47160 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19355478-19357477 Arabidopsis thaliana
AT2G47160 5.0kb upstream 5.0kb upstream 8670 true Chr2: 19357478-19366147 Arabidopsis thaliana
AT2G47160 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19361148-19366147 Arabidopsis thaliana
AT2G47160 5.0kb downstream 5.0kb downstream 8670 true Chr2: 19352478-19361147 Arabidopsis thaliana
AT2G47160 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19352478-19357477 Arabidopsis thaliana
AT2G47160 10.0kb upstream 10.0kb upstream 13670 true Chr2: 19357478-19371147 Arabidopsis thaliana
AT2G47160 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19361148-19371147 Arabidopsis thaliana
AT2G47160 10.0kb downstream 10.0kb downstream 13670 true Chr2: 19347478-19361147 Arabidopsis thaliana
AT2G47160 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19347478-19357477 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362661 5261 Brassicaceae View MSA
123840395 5264 Brassicales-Malvales View MSA
124339621 5266 SBM View MSA
124238035 5268 Malvidae View MSA
124062644 5270 Rosid View MSA
123739713 5271 Pentapetalae View MSA
122788389 5272 Eudicot View MSA
122051524 5273 Angiosperm View MSA
121349388 5274 Embryophyte View MSA
123428770 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.035       High
cufflinks 4.568        
cufflinks 2.926       Low
cufflinks 5.072        
cufflinks 2.863       Low
cufflinks 4.339        

0 Strain