Gene : AT2G47090 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22938//PTHR22938:SF0 - ZINC FINGER PROTEIN 598 // ZINC FINGER PROTEIN 598 Genomic Order:  4138
Name:  ? AT2G47090 Secondary Identifier:  ? PAC:19638863
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47090 0.5kb upstream 0.5kb upstream 3591 true Chr2: 19341251-19344841 Arabidopsis thaliana
AT2G47090 0.5kb upstream 0.5kb upstream 500 false Chr2: 19344342-19344841 Arabidopsis thaliana
AT2G47090 0.5kb downstream 0.5kb downstream 3591 true Chr2: 19340751-19344341 Arabidopsis thaliana
AT2G47090 0.5kb downstream 0.5kb downstream 500 false Chr2: 19340751-19341250 Arabidopsis thaliana
AT2G47090 1.0kb upstream 1.0kb upstream 4091 true Chr2: 19341251-19345341 Arabidopsis thaliana
AT2G47090 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19344342-19345341 Arabidopsis thaliana
AT2G47090 1.0kb downstream 1.0kb downstream 4091 true Chr2: 19340251-19344341 Arabidopsis thaliana
AT2G47090 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19340251-19341250 Arabidopsis thaliana
AT2G47090 2.0kb upstream 2.0kb upstream 5091 true Chr2: 19341251-19346341 Arabidopsis thaliana
AT2G47090 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19344342-19346341 Arabidopsis thaliana
AT2G47090 2.0kb downstream 2.0kb downstream 5091 true Chr2: 19339251-19344341 Arabidopsis thaliana
AT2G47090 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19339251-19341250 Arabidopsis thaliana
AT2G47090 5.0kb upstream 5.0kb upstream 8091 true Chr2: 19341251-19349341 Arabidopsis thaliana
AT2G47090 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19344342-19349341 Arabidopsis thaliana
AT2G47090 5.0kb downstream 5.0kb downstream 8091 true Chr2: 19336251-19344341 Arabidopsis thaliana
AT2G47090 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19336251-19341250 Arabidopsis thaliana
AT2G47090 10.0kb upstream 10.0kb upstream 13091 true Chr2: 19341251-19354341 Arabidopsis thaliana
AT2G47090 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19344342-19354341 Arabidopsis thaliana
AT2G47090 10.0kb downstream 10.0kb downstream 13091 true Chr2: 19331251-19344341 Arabidopsis thaliana
AT2G47090 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19331251-19341250 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360450 5261 Brassicaceae View MSA
123797956 5264 Brassicales-Malvales View MSA
124295652 5266 SBM View MSA
124148029 5268 Malvidae View MSA
123874115 5270 Rosid View MSA
123753693 5271 Pentapetalae View MSA
122788465 5272 Eudicot View MSA
122042596 5273 Angiosperm View MSA
121350951 5274 Embryophyte View MSA
123428352 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.926        
cufflinks 2.842        
cufflinks 1.437       Low
cufflinks 2.639        
cufflinks 1.381       Low
cufflinks 2.973       High

0 Strain