Gene : DUF6 A. thaliana TAIR10
Primary Identifier:  ? AT2G47230 Defline:  (1 of 7) PTHR31917:SF20 - AGENET DOMAIN-CONTAINING PROTEIN-RELATED
Genomic Order:  4152 Name:  ? AT2G47230
Secondary Identifier:  ? PAC:19638784
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47230 0.5kb upstream 0.5kb upstream 3715 true Chr2: 19386520-19390234 Arabidopsis thaliana
AT2G47230 0.5kb upstream 0.5kb upstream 500 false Chr2: 19386520-19387019 Arabidopsis thaliana
AT2G47230 0.5kb downstream 0.5kb downstream 3715 true Chr2: 19387020-19390734 Arabidopsis thaliana
AT2G47230 0.5kb downstream 0.5kb downstream 500 false Chr2: 19390235-19390734 Arabidopsis thaliana
AT2G47230 1.0kb upstream 1.0kb upstream 4215 true Chr2: 19386020-19390234 Arabidopsis thaliana
AT2G47230 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19386020-19387019 Arabidopsis thaliana
AT2G47230 1.0kb downstream 1.0kb downstream 4215 true Chr2: 19387020-19391234 Arabidopsis thaliana
AT2G47230 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19390235-19391234 Arabidopsis thaliana
AT2G47230 2.0kb upstream 2.0kb upstream 5215 true Chr2: 19385020-19390234 Arabidopsis thaliana
AT2G47230 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19385020-19387019 Arabidopsis thaliana
AT2G47230 2.0kb downstream 2.0kb downstream 5215 true Chr2: 19387020-19392234 Arabidopsis thaliana
AT2G47230 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19390235-19392234 Arabidopsis thaliana
AT2G47230 5.0kb upstream 5.0kb upstream 8215 true Chr2: 19382020-19390234 Arabidopsis thaliana
AT2G47230 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19382020-19387019 Arabidopsis thaliana
AT2G47230 5.0kb downstream 5.0kb downstream 8215 true Chr2: 19387020-19395234 Arabidopsis thaliana
AT2G47230 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19390235-19395234 Arabidopsis thaliana
AT2G47230 10.0kb upstream 10.0kb upstream 13215 true Chr2: 19377020-19390234 Arabidopsis thaliana
AT2G47230 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19377020-19387019 Arabidopsis thaliana
AT2G47230 10.0kb downstream 10.0kb downstream 13215 true Chr2: 19387020-19400234 Arabidopsis thaliana
AT2G47230 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19390235-19400234 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378271 5261 Brassicaceae View MSA
123801809 5264 Brassicales-Malvales View MSA
124299068 5266 SBM View MSA
124251657 5268 Malvidae View MSA
124071836 5270 Rosid View MSA
123746152 5271 Pentapetalae View MSA
122796207 5272 Eudicot View MSA
122050823 5273 Angiosperm View MSA
121349360 5274 Embryophyte View MSA
123381286 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.004        
cufflinks 5.011       High
cufflinks 0.817        
cufflinks 4.035        
cufflinks 0.672       Low
cufflinks 3.907        

0 Strain