Gene : ARF1A1C A. thaliana TAIR10
Primary Identifier:  ? AT2G47170 Defline:  (1 of 6) K07937 - ADP-ribosylation factor 1 (ARF1)
Genomic Order:  4146 Name:  ? AT2G47170
Secondary Identifier:  ? PAC:19641237
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47170 0.5kb upstream 0.5kb upstream 2718 true Chr2: 19366123-19368840 Arabidopsis thaliana
AT2G47170 0.5kb upstream 0.5kb upstream 500 false Chr2: 19366123-19366622 Arabidopsis thaliana
AT2G47170 0.5kb downstream 0.5kb downstream 2718 true Chr2: 19366623-19369340 Arabidopsis thaliana
AT2G47170 0.5kb downstream 0.5kb downstream 500 false Chr2: 19368841-19369340 Arabidopsis thaliana
AT2G47170 1.0kb upstream 1.0kb upstream 3218 true Chr2: 19365623-19368840 Arabidopsis thaliana
AT2G47170 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19365623-19366622 Arabidopsis thaliana
AT2G47170 1.0kb downstream 1.0kb downstream 3218 true Chr2: 19366623-19369840 Arabidopsis thaliana
AT2G47170 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19368841-19369840 Arabidopsis thaliana
AT2G47170 2.0kb upstream 2.0kb upstream 4218 true Chr2: 19364623-19368840 Arabidopsis thaliana
AT2G47170 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19364623-19366622 Arabidopsis thaliana
AT2G47170 2.0kb downstream 2.0kb downstream 4218 true Chr2: 19366623-19370840 Arabidopsis thaliana
AT2G47170 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19368841-19370840 Arabidopsis thaliana
AT2G47170 5.0kb upstream 5.0kb upstream 7218 true Chr2: 19361623-19368840 Arabidopsis thaliana
AT2G47170 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19361623-19366622 Arabidopsis thaliana
AT2G47170 5.0kb downstream 5.0kb downstream 7218 true Chr2: 19366623-19373840 Arabidopsis thaliana
AT2G47170 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19368841-19373840 Arabidopsis thaliana
AT2G47170 10.0kb upstream 10.0kb upstream 12218 true Chr2: 19356623-19368840 Arabidopsis thaliana
AT2G47170 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19356623-19366622 Arabidopsis thaliana
AT2G47170 10.0kb downstream 10.0kb downstream 12218 true Chr2: 19366623-19378840 Arabidopsis thaliana
AT2G47170 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19368841-19378840 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379959 5261 Brassicaceae View MSA
123839591 5264 Brassicales-Malvales View MSA
124351572 5266 SBM View MSA
124253739 5268 Malvidae View MSA
124074730 5270 Rosid View MSA
123752155 5271 Pentapetalae View MSA
122796047 5272 Eudicot View MSA
122049759 5273 Angiosperm View MSA
123429166 5275 Viridiplantae View MSA
121351098 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 92.011     High  
cufflinks 99.941     High  
cufflinks 78.803     High Low
cufflinks 108.327     High  
cufflinks 86.894     High  
cufflinks 124.128     High High

0 Strain