Gene : AT2G47140 A. thaliana TAIR10
Defline:  (1 of 6) 1.1.1.145 - 3-beta-hydroxy-Delta(5)-steroid dehydrogenase / Progesterone reductase Genomic Order:  4143
Name:  ? AT2G47140 Secondary Identifier:  ? PAC:19643354
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47140 0.5kb upstream 0.5kb upstream 1849 true Chr2: 19350740-19352588 Arabidopsis thaliana
AT2G47140 0.5kb upstream 0.5kb upstream 500 false Chr2: 19352089-19352588 Arabidopsis thaliana
AT2G47140 0.5kb downstream 0.5kb downstream 1849 true Chr2: 19350240-19352088 Arabidopsis thaliana
AT2G47140 0.5kb downstream 0.5kb downstream 500 false Chr2: 19350240-19350739 Arabidopsis thaliana
AT2G47140 1.0kb upstream 1.0kb upstream 2349 true Chr2: 19350740-19353088 Arabidopsis thaliana
AT2G47140 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19352089-19353088 Arabidopsis thaliana
AT2G47140 1.0kb downstream 1.0kb downstream 2349 true Chr2: 19349740-19352088 Arabidopsis thaliana
AT2G47140 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19349740-19350739 Arabidopsis thaliana
AT2G47140 2.0kb upstream 2.0kb upstream 3349 true Chr2: 19350740-19354088 Arabidopsis thaliana
AT2G47140 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19352089-19354088 Arabidopsis thaliana
AT2G47140 2.0kb downstream 2.0kb downstream 3349 true Chr2: 19348740-19352088 Arabidopsis thaliana
AT2G47140 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19348740-19350739 Arabidopsis thaliana
AT2G47140 5.0kb upstream 5.0kb upstream 6349 true Chr2: 19350740-19357088 Arabidopsis thaliana
AT2G47140 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19352089-19357088 Arabidopsis thaliana
AT2G47140 5.0kb downstream 5.0kb downstream 6349 true Chr2: 19345740-19352088 Arabidopsis thaliana
AT2G47140 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19345740-19350739 Arabidopsis thaliana
AT2G47140 10.0kb upstream 10.0kb upstream 11349 true Chr2: 19350740-19362088 Arabidopsis thaliana
AT2G47140 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19352089-19362088 Arabidopsis thaliana
AT2G47140 10.0kb downstream 10.0kb downstream 11349 true Chr2: 19340740-19352088 Arabidopsis thaliana
AT2G47140 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19340740-19350739 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362602 5261 Brassicaceae View MSA
123841481 5264 Brassicales-Malvales View MSA
124340680 5266 SBM View MSA
124251999 5268 Malvidae View MSA
124066555 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.643        
cufflinks 1.935        
cufflinks 0.175     Low Low
cufflinks 2.377        
cufflinks 0.337        
cufflinks 3.427       High

0 Strain