Gene : PIL1 A. thaliana TAIR10
Primary Identifier:  ? AT2G46970 Defline:  (1 of 2) PTHR12565:SF3 - FI24210P1
Genomic Order:  4126 Name:  ? AT2G46970
Secondary Identifier:  ? PAC:19640754
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46970 0.5kb upstream 0.5kb upstream 2837 true Chr2: 19295490-19298326 Arabidopsis thaliana
AT2G46970 0.5kb upstream 0.5kb upstream 500 false Chr2: 19297827-19298326 Arabidopsis thaliana
AT2G46970 0.5kb downstream 0.5kb downstream 2837 true Chr2: 19294990-19297826 Arabidopsis thaliana
AT2G46970 0.5kb downstream 0.5kb downstream 500 false Chr2: 19294990-19295489 Arabidopsis thaliana
AT2G46970 1.0kb upstream 1.0kb upstream 3337 true Chr2: 19295490-19298826 Arabidopsis thaliana
AT2G46970 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19297827-19298826 Arabidopsis thaliana
AT2G46970 1.0kb downstream 1.0kb downstream 3337 true Chr2: 19294490-19297826 Arabidopsis thaliana
AT2G46970 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19294490-19295489 Arabidopsis thaliana
AT2G46970 2.0kb upstream 2.0kb upstream 4337 true Chr2: 19295490-19299826 Arabidopsis thaliana
AT2G46970 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19297827-19299826 Arabidopsis thaliana
AT2G46970 2.0kb downstream 2.0kb downstream 4337 true Chr2: 19293490-19297826 Arabidopsis thaliana
AT2G46970 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19293490-19295489 Arabidopsis thaliana
AT2G46970 5.0kb upstream 5.0kb upstream 7337 true Chr2: 19295490-19302826 Arabidopsis thaliana
AT2G46970 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19297827-19302826 Arabidopsis thaliana
AT2G46970 5.0kb downstream 5.0kb downstream 7337 true Chr2: 19290490-19297826 Arabidopsis thaliana
AT2G46970 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19290490-19295489 Arabidopsis thaliana
AT2G46970 10.0kb upstream 10.0kb upstream 12337 true Chr2: 19295490-19307826 Arabidopsis thaliana
AT2G46970 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19297827-19307826 Arabidopsis thaliana
AT2G46970 10.0kb downstream 10.0kb downstream 12337 true Chr2: 19285490-19297826 Arabidopsis thaliana
AT2G46970 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19285490-19295489 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380263 5261 Brassicaceae View MSA
123802628 5264 Brassicales-Malvales View MSA
124299809 5266 SBM View MSA
124151130 5268 Malvidae View MSA
124075094 5270 Rosid View MSA
123752650 5271 Pentapetalae View MSA
122774700 5272 Eudicot View MSA
122048181 5273 Angiosperm View MSA
121348763 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.488        
cufflinks 2.195        
cufflinks 0.375        
cufflinks 1.926        
cufflinks 0.284       Low
cufflinks 3.007       High

0 Strain