Gene : AT2G46890 A. thaliana TAIR10
Defline:  (1 of 3) 1.3.1.22 - 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) / Cholestenone 5-alpha-reductase Genomic Order:  4117
Name:  ? AT2G46890 Secondary Identifier:  ? PAC:19638706
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46890 0.5kb upstream 0.5kb upstream 1938 true Chr2: 19266733-19268670 Arabidopsis thaliana
AT2G46890 0.5kb upstream 0.5kb upstream 500 false Chr2: 19268171-19268670 Arabidopsis thaliana
AT2G46890 0.5kb downstream 0.5kb downstream 1938 true Chr2: 19266233-19268170 Arabidopsis thaliana
AT2G46890 0.5kb downstream 0.5kb downstream 500 false Chr2: 19266233-19266732 Arabidopsis thaliana
AT2G46890 1.0kb upstream 1.0kb upstream 2438 true Chr2: 19266733-19269170 Arabidopsis thaliana
AT2G46890 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19268171-19269170 Arabidopsis thaliana
AT2G46890 1.0kb downstream 1.0kb downstream 2438 true Chr2: 19265733-19268170 Arabidopsis thaliana
AT2G46890 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19265733-19266732 Arabidopsis thaliana
AT2G46890 2.0kb upstream 2.0kb upstream 3438 true Chr2: 19266733-19270170 Arabidopsis thaliana
AT2G46890 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19268171-19270170 Arabidopsis thaliana
AT2G46890 2.0kb downstream 2.0kb downstream 3438 true Chr2: 19264733-19268170 Arabidopsis thaliana
AT2G46890 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19264733-19266732 Arabidopsis thaliana
AT2G46890 5.0kb upstream 5.0kb upstream 6438 true Chr2: 19266733-19273170 Arabidopsis thaliana
AT2G46890 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19268171-19273170 Arabidopsis thaliana
AT2G46890 5.0kb downstream 5.0kb downstream 6438 true Chr2: 19261733-19268170 Arabidopsis thaliana
AT2G46890 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19261733-19266732 Arabidopsis thaliana
AT2G46890 10.0kb upstream 10.0kb upstream 11438 true Chr2: 19266733-19278170 Arabidopsis thaliana
AT2G46890 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19268171-19278170 Arabidopsis thaliana
AT2G46890 10.0kb downstream 10.0kb downstream 11438 true Chr2: 19256733-19268170 Arabidopsis thaliana
AT2G46890 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19256733-19266732 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363566 5261 Brassicaceae View MSA
123838379 5264 Brassicales-Malvales View MSA
124339207 5266 SBM View MSA
124240833 5268 Malvidae View MSA
124062639 5270 Rosid View MSA
123740313 5271 Pentapetalae View MSA
122796551 5272 Eudicot View MSA
122046311 5273 Angiosperm View MSA
123429173 5275 Viridiplantae View MSA
121346898 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.734        
cufflinks 90.747     High  
cufflinks 2.888        
cufflinks 54.337     High  
cufflinks 2.408       Low
cufflinks 142.738     High High

0 Strain