Gene : AT2G47300 A. thaliana TAIR10
Defline:  (1 of 1) K01164 - ribonuclease P/MRP protein subunit POP1 (POP1) Genomic Order:  4158
Name:  ? AT2G47300 Secondary Identifier:  ? PAC:19642163
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47300 0.5kb upstream 0.5kb upstream 4271 true Chr2: 19417971-19422241 Arabidopsis thaliana
AT2G47300 0.5kb upstream 0.5kb upstream 500 false Chr2: 19417971-19418470 Arabidopsis thaliana
AT2G47300 0.5kb downstream 0.5kb downstream 4271 true Chr2: 19418471-19422741 Arabidopsis thaliana
AT2G47300 0.5kb downstream 0.5kb downstream 500 false Chr2: 19422242-19422741 Arabidopsis thaliana
AT2G47300 1.0kb upstream 1.0kb upstream 4771 true Chr2: 19417471-19422241 Arabidopsis thaliana
AT2G47300 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19417471-19418470 Arabidopsis thaliana
AT2G47300 1.0kb downstream 1.0kb downstream 4771 true Chr2: 19418471-19423241 Arabidopsis thaliana
AT2G47300 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19422242-19423241 Arabidopsis thaliana
AT2G47300 2.0kb upstream 2.0kb upstream 5771 true Chr2: 19416471-19422241 Arabidopsis thaliana
AT2G47300 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19416471-19418470 Arabidopsis thaliana
AT2G47300 2.0kb downstream 2.0kb downstream 5771 true Chr2: 19418471-19424241 Arabidopsis thaliana
AT2G47300 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19422242-19424241 Arabidopsis thaliana
AT2G47300 5.0kb upstream 5.0kb upstream 8771 true Chr2: 19413471-19422241 Arabidopsis thaliana
AT2G47300 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19413471-19418470 Arabidopsis thaliana
AT2G47300 5.0kb downstream 5.0kb downstream 8771 true Chr2: 19418471-19427241 Arabidopsis thaliana
AT2G47300 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19422242-19427241 Arabidopsis thaliana
AT2G47300 10.0kb upstream 10.0kb upstream 13771 true Chr2: 19408471-19422241 Arabidopsis thaliana
AT2G47300 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19408471-19418470 Arabidopsis thaliana
AT2G47300 10.0kb downstream 10.0kb downstream 13771 true Chr2: 19418471-19432241 Arabidopsis thaliana
AT2G47300 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19422242-19432241 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373094 5261 Brassicaceae View MSA
123831611 5264 Brassicales-Malvales View MSA
124340051 5266 SBM View MSA
124240091 5268 Malvidae View MSA
124069043 5270 Rosid View MSA
123740303 5271 Pentapetalae View MSA
122791555 5272 Eudicot View MSA
122047231 5273 Angiosperm View MSA
121344727 5274 Embryophyte View MSA
123380091 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.671        
cufflinks 0.566        
cufflinks 0.483        
cufflinks 0.662        
cufflinks 0.394       Low
cufflinks 0.583        

0 Strain