Gene : AT2G46540 A. thaliana TAIR10
Genomic Order:  4079 Name:  ? AT2G46540
Secondary Identifier:  ? PAC:19643021
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46540 0.5kb upstream 0.5kb upstream 1798 true Chr2: 19110472-19112269 Arabidopsis thaliana
AT2G46540 0.5kb upstream 0.5kb upstream 500 false Chr2: 19111770-19112269 Arabidopsis thaliana
AT2G46540 0.5kb downstream 0.5kb downstream 1798 true Chr2: 19109972-19111769 Arabidopsis thaliana
AT2G46540 0.5kb downstream 0.5kb downstream 500 false Chr2: 19109972-19110471 Arabidopsis thaliana
AT2G46540 1.0kb upstream 1.0kb upstream 2298 true Chr2: 19110472-19112769 Arabidopsis thaliana
AT2G46540 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19111770-19112769 Arabidopsis thaliana
AT2G46540 1.0kb downstream 1.0kb downstream 2298 true Chr2: 19109472-19111769 Arabidopsis thaliana
AT2G46540 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19109472-19110471 Arabidopsis thaliana
AT2G46540 2.0kb upstream 2.0kb upstream 3298 true Chr2: 19110472-19113769 Arabidopsis thaliana
AT2G46540 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19111770-19113769 Arabidopsis thaliana
AT2G46540 2.0kb downstream 2.0kb downstream 3298 true Chr2: 19108472-19111769 Arabidopsis thaliana
AT2G46540 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19108472-19110471 Arabidopsis thaliana
AT2G46540 5.0kb upstream 5.0kb upstream 6298 true Chr2: 19110472-19116769 Arabidopsis thaliana
AT2G46540 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19111770-19116769 Arabidopsis thaliana
AT2G46540 5.0kb downstream 5.0kb downstream 6298 true Chr2: 19105472-19111769 Arabidopsis thaliana
AT2G46540 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19105472-19110471 Arabidopsis thaliana
AT2G46540 10.0kb upstream 10.0kb upstream 11298 true Chr2: 19110472-19121769 Arabidopsis thaliana
AT2G46540 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19111770-19121769 Arabidopsis thaliana
AT2G46540 10.0kb downstream 10.0kb downstream 11298 true Chr2: 19100472-19111769 Arabidopsis thaliana
AT2G46540 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19100472-19110471 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375395 5261 Brassicaceae View MSA
123831012 5264 Brassicales-Malvales View MSA
124321705 5266 SBM View MSA
124241258 5268 Malvidae View MSA
124064747 5270 Rosid View MSA
123747017 5271 Pentapetalae View MSA
122786153 5272 Eudicot View MSA
122046096 5273 Angiosperm View MSA
121344412 5274 Embryophyte View MSA
123380039 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.056        
cufflinks 22.583        
cufflinks 18.885       Low
cufflinks 21.878        
cufflinks 19.562        
cufflinks 24.717       High

0 Strain