Gene : AT2G46560 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13950//PTHR13950:SF9 - RABCONNECTIN-RELATED // RABCONNECTIN-3A Genomic Order:  4081
Name:  ? AT2G46560 Secondary Identifier:  ? PAC:19642488
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46560 0.5kb upstream 0.5kb upstream 10986 true Chr2: 19115371-19126356 Arabidopsis thaliana
AT2G46560 0.5kb upstream 0.5kb upstream 500 false Chr2: 19125857-19126356 Arabidopsis thaliana
AT2G46560 0.5kb downstream 0.5kb downstream 10986 true Chr2: 19114871-19125856 Arabidopsis thaliana
AT2G46560 0.5kb downstream 0.5kb downstream 500 false Chr2: 19114871-19115370 Arabidopsis thaliana
AT2G46560 1.0kb upstream 1.0kb upstream 11486 true Chr2: 19115371-19126856 Arabidopsis thaliana
AT2G46560 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19125857-19126856 Arabidopsis thaliana
AT2G46560 1.0kb downstream 1.0kb downstream 11486 true Chr2: 19114371-19125856 Arabidopsis thaliana
AT2G46560 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19114371-19115370 Arabidopsis thaliana
AT2G46560 2.0kb upstream 2.0kb upstream 12486 true Chr2: 19115371-19127856 Arabidopsis thaliana
AT2G46560 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19125857-19127856 Arabidopsis thaliana
AT2G46560 2.0kb downstream 2.0kb downstream 12486 true Chr2: 19113371-19125856 Arabidopsis thaliana
AT2G46560 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19113371-19115370 Arabidopsis thaliana
AT2G46560 5.0kb upstream 5.0kb upstream 15486 true Chr2: 19115371-19130856 Arabidopsis thaliana
AT2G46560 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19125857-19130856 Arabidopsis thaliana
AT2G46560 5.0kb downstream 5.0kb downstream 15486 true Chr2: 19110371-19125856 Arabidopsis thaliana
AT2G46560 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19110371-19115370 Arabidopsis thaliana
AT2G46560 10.0kb upstream 10.0kb upstream 20486 true Chr2: 19115371-19135856 Arabidopsis thaliana
AT2G46560 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19125857-19135856 Arabidopsis thaliana
AT2G46560 10.0kb downstream 10.0kb downstream 20486 true Chr2: 19105371-19125856 Arabidopsis thaliana
AT2G46560 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19105371-19115370 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365515 5261 Brassicaceae View MSA
123831587 5264 Brassicales-Malvales View MSA
124342018 5266 SBM View MSA
124239394 5268 Malvidae View MSA
124050248 5270 Rosid View MSA
123750499 5271 Pentapetalae View MSA
122789349 5272 Eudicot View MSA
122049710 5273 Angiosperm View MSA
121345516 5274 Embryophyte View MSA
123380232 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.208        
cufflinks 12.411        
cufflinks 9.375       Low
cufflinks 13.461       High
cufflinks 9.76        
cufflinks 13.385       High

0 Strain