Gene : AIB A. thaliana TAIR10
Primary Identifier:  ? AT2G46510 Defline:  (1 of 2) PTHR11514//PTHR11514:SF47 - MYC // TRANSCRIPTION FACTOR ABA-INDUCIBLE BHLH-TYPE-RELATED
Genomic Order:  4075 Name:  ? AT2G46510
Secondary Identifier:  ? PAC:19642165
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46510 0.5kb upstream 0.5kb upstream 2863 true Chr2: 19090953-19093815 Arabidopsis thaliana
AT2G46510 0.5kb upstream 0.5kb upstream 500 false Chr2: 19093316-19093815 Arabidopsis thaliana
AT2G46510 0.5kb downstream 0.5kb downstream 2863 true Chr2: 19090453-19093315 Arabidopsis thaliana
AT2G46510 0.5kb downstream 0.5kb downstream 500 false Chr2: 19090453-19090952 Arabidopsis thaliana
AT2G46510 1.0kb upstream 1.0kb upstream 3363 true Chr2: 19090953-19094315 Arabidopsis thaliana
AT2G46510 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19093316-19094315 Arabidopsis thaliana
AT2G46510 1.0kb downstream 1.0kb downstream 3363 true Chr2: 19089953-19093315 Arabidopsis thaliana
AT2G46510 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19089953-19090952 Arabidopsis thaliana
AT2G46510 2.0kb upstream 2.0kb upstream 4363 true Chr2: 19090953-19095315 Arabidopsis thaliana
AT2G46510 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19093316-19095315 Arabidopsis thaliana
AT2G46510 2.0kb downstream 2.0kb downstream 4363 true Chr2: 19088953-19093315 Arabidopsis thaliana
AT2G46510 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19088953-19090952 Arabidopsis thaliana
AT2G46510 5.0kb upstream 5.0kb upstream 7363 true Chr2: 19090953-19098315 Arabidopsis thaliana
AT2G46510 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19093316-19098315 Arabidopsis thaliana
AT2G46510 5.0kb downstream 5.0kb downstream 7363 true Chr2: 19085953-19093315 Arabidopsis thaliana
AT2G46510 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19085953-19090952 Arabidopsis thaliana
AT2G46510 10.0kb upstream 10.0kb upstream 12363 true Chr2: 19090953-19103315 Arabidopsis thaliana
AT2G46510 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19093316-19103315 Arabidopsis thaliana
AT2G46510 10.0kb downstream 10.0kb downstream 12363 true Chr2: 19080953-19093315 Arabidopsis thaliana
AT2G46510 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19080953-19090952 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377861 5261 Brassicaceae View MSA
123841251 5264 Brassicales-Malvales View MSA
124346242 5266 SBM View MSA
124237618 5268 Malvidae View MSA
124067031 5270 Rosid View MSA
123743665 5271 Pentapetalae View MSA
122788988 5272 Eudicot View MSA
122049389 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.929     High Low
cufflinks 66.962     High High
cufflinks 54.395     High  
cufflinks 54.941     High  
cufflinks 37.107     High  
cufflinks 50.733     High  

0 Strain