Gene : iqd9 A. thaliana TAIR10
Primary Identifier:  ? AT2G33990 Defline:  (1 of 1) PTHR32295:SF9 - IQ-DOMAIN 9 PROTEIN
Genomic Order:  2726 Name:  ? AT2G33990
Secondary Identifier:  ? PAC:19640888
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G33990 0.5kb upstream 0.5kb upstream 2466 true Chr2: 14360276-14362741 Arabidopsis thaliana
AT2G33990 0.5kb upstream 0.5kb upstream 500 false Chr2: 14362242-14362741 Arabidopsis thaliana
AT2G33990 0.5kb downstream 0.5kb downstream 2466 true Chr2: 14359776-14362241 Arabidopsis thaliana
AT2G33990 0.5kb downstream 0.5kb downstream 500 false Chr2: 14359776-14360275 Arabidopsis thaliana
AT2G33990 1.0kb upstream 1.0kb upstream 2966 true Chr2: 14360276-14363241 Arabidopsis thaliana
AT2G33990 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14362242-14363241 Arabidopsis thaliana
AT2G33990 1.0kb downstream 1.0kb downstream 2966 true Chr2: 14359276-14362241 Arabidopsis thaliana
AT2G33990 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14359276-14360275 Arabidopsis thaliana
AT2G33990 2.0kb upstream 2.0kb upstream 3966 true Chr2: 14360276-14364241 Arabidopsis thaliana
AT2G33990 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14362242-14364241 Arabidopsis thaliana
AT2G33990 2.0kb downstream 2.0kb downstream 3966 true Chr2: 14358276-14362241 Arabidopsis thaliana
AT2G33990 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14358276-14360275 Arabidopsis thaliana
AT2G33990 5.0kb upstream 5.0kb upstream 6966 true Chr2: 14360276-14367241 Arabidopsis thaliana
AT2G33990 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14362242-14367241 Arabidopsis thaliana
AT2G33990 5.0kb downstream 5.0kb downstream 6966 true Chr2: 14355276-14362241 Arabidopsis thaliana
AT2G33990 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14355276-14360275 Arabidopsis thaliana
AT2G33990 10.0kb upstream 10.0kb upstream 11966 true Chr2: 14360276-14372241 Arabidopsis thaliana
AT2G33990 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14362242-14372241 Arabidopsis thaliana
AT2G33990 10.0kb downstream 10.0kb downstream 11966 true Chr2: 14350276-14362241 Arabidopsis thaliana
AT2G33990 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14350276-14360275 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371076 5261 Brassicaceae View MSA
123835931 5264 Brassicales-Malvales View MSA
124338271 5266 SBM View MSA
124238009 5268 Malvidae View MSA
124067076 5270 Rosid View MSA
123750715 5271 Pentapetalae View MSA
122787136 5272 Eudicot View MSA
122044969 5273 Angiosperm View MSA
121310374 5274 Embryophyte View MSA
123347875 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.875        
cufflinks 12.141        
cufflinks 8.778        
cufflinks 12.319        
cufflinks 6.02       Low
cufflinks 15.774        

0 Strain