Gene : PDLP3 A. thaliana TAIR10
Primary Identifier:  ? AT2G33330 Defline:  (1 of 3) PTHR32080:SF4 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN 11-RELATED
Genomic Order:  2657 Name:  ? AT2G33330
Secondary Identifier:  ? PAC:19639568
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G33330 0.5kb upstream 0.5kb upstream 2748 true Chr2: 14122890-14125637 Arabidopsis thaliana
AT2G33330 0.5kb upstream 0.5kb upstream 500 false Chr2: 14125138-14125637 Arabidopsis thaliana
AT2G33330 0.5kb downstream 0.5kb downstream 2748 true Chr2: 14122390-14125137 Arabidopsis thaliana
AT2G33330 0.5kb downstream 0.5kb downstream 500 false Chr2: 14122390-14122889 Arabidopsis thaliana
AT2G33330 1.0kb upstream 1.0kb upstream 3248 true Chr2: 14122890-14126137 Arabidopsis thaliana
AT2G33330 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14125138-14126137 Arabidopsis thaliana
AT2G33330 1.0kb downstream 1.0kb downstream 3248 true Chr2: 14121890-14125137 Arabidopsis thaliana
AT2G33330 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14121890-14122889 Arabidopsis thaliana
AT2G33330 2.0kb upstream 2.0kb upstream 4248 true Chr2: 14122890-14127137 Arabidopsis thaliana
AT2G33330 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14125138-14127137 Arabidopsis thaliana
AT2G33330 2.0kb downstream 2.0kb downstream 4248 true Chr2: 14120890-14125137 Arabidopsis thaliana
AT2G33330 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14120890-14122889 Arabidopsis thaliana
AT2G33330 5.0kb upstream 5.0kb upstream 7248 true Chr2: 14122890-14130137 Arabidopsis thaliana
AT2G33330 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14125138-14130137 Arabidopsis thaliana
AT2G33330 5.0kb downstream 5.0kb downstream 7248 true Chr2: 14117890-14125137 Arabidopsis thaliana
AT2G33330 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14117890-14122889 Arabidopsis thaliana
AT2G33330 10.0kb upstream 10.0kb upstream 12248 true Chr2: 14122890-14135137 Arabidopsis thaliana
AT2G33330 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14125138-14135137 Arabidopsis thaliana
AT2G33330 10.0kb downstream 10.0kb downstream 12248 true Chr2: 14112890-14125137 Arabidopsis thaliana
AT2G33330 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14112890-14122889 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040946 5273 Angiosperm View MSA
122368803 5261 Brassicaceae View MSA
123799657 5264 Brassicales-Malvales View MSA
124297154 5266 SBM View MSA
124149114 5268 Malvidae View MSA
123874985 5270 Rosid View MSA
123743595 5271 Pentapetalae View MSA
122793382 5272 Eudicot View MSA
121309775 5274 Embryophyte View MSA
123347437 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.463        
cufflinks 20.205        
cufflinks 11.037        
cufflinks 15.326        
cufflinks 5.336       Low
cufflinks 19.291        

0 Strain