Gene : AT2G32450 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23083//PTHR23083:SF380 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Genomic Order:  2559
Name:  ? AT2G32450 Secondary Identifier:  ? PAC:19642811
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G32450 0.5kb upstream 0.5kb upstream 3310 true Chr2: 13777949-13781258 Arabidopsis thaliana
AT2G32450 0.5kb upstream 0.5kb upstream 500 false Chr2: 13777949-13778448 Arabidopsis thaliana
AT2G32450 0.5kb downstream 0.5kb downstream 3310 true Chr2: 13778449-13781758 Arabidopsis thaliana
AT2G32450 0.5kb downstream 0.5kb downstream 500 false Chr2: 13781259-13781758 Arabidopsis thaliana
AT2G32450 1.0kb upstream 1.0kb upstream 3810 true Chr2: 13777449-13781258 Arabidopsis thaliana
AT2G32450 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13777449-13778448 Arabidopsis thaliana
AT2G32450 1.0kb downstream 1.0kb downstream 3810 true Chr2: 13778449-13782258 Arabidopsis thaliana
AT2G32450 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13781259-13782258 Arabidopsis thaliana
AT2G32450 2.0kb upstream 2.0kb upstream 4810 true Chr2: 13776449-13781258 Arabidopsis thaliana
AT2G32450 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13776449-13778448 Arabidopsis thaliana
AT2G32450 2.0kb downstream 2.0kb downstream 4810 true Chr2: 13778449-13783258 Arabidopsis thaliana
AT2G32450 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13781259-13783258 Arabidopsis thaliana
AT2G32450 5.0kb upstream 5.0kb upstream 7810 true Chr2: 13773449-13781258 Arabidopsis thaliana
AT2G32450 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13773449-13778448 Arabidopsis thaliana
AT2G32450 5.0kb downstream 5.0kb downstream 7810 true Chr2: 13778449-13786258 Arabidopsis thaliana
AT2G32450 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13781259-13786258 Arabidopsis thaliana
AT2G32450 10.0kb upstream 10.0kb upstream 12810 true Chr2: 13768449-13781258 Arabidopsis thaliana
AT2G32450 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13768449-13778448 Arabidopsis thaliana
AT2G32450 10.0kb downstream 10.0kb downstream 12810 true Chr2: 13778449-13791258 Arabidopsis thaliana
AT2G32450 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13781259-13791258 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376265 5261 Brassicaceae View MSA
123837177 5264 Brassicales-Malvales View MSA
124340827 5266 SBM View MSA
124238713 5268 Malvidae View MSA
124068399 5270 Rosid View MSA
123739608 5271 Pentapetalae View MSA
122792397 5272 Eudicot View MSA
122043324 5273 Angiosperm View MSA
121346107 5274 Embryophyte View MSA
123380332 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.809        
cufflinks 9.753        
cufflinks 7.092       Low
cufflinks 9.497        
cufflinks 7.884        
cufflinks 10.782       High

0 Strain