Gene : ROT4 A. thaliana TAIR10
Primary Identifier:  ? AT2G36985 Defline:  (1 of 23) PF08137 - DVL family (DVL)
Genomic Order:  3055 Name:  ? AT2G36985
Secondary Identifier:  ? PAC:19640087
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G36985 0.5kb upstream 0.5kb upstream 914 true Chr2: 15534779-15535692 Arabidopsis thaliana
AT2G36985 0.5kb upstream 0.5kb upstream 500 false Chr2: 15535193-15535692 Arabidopsis thaliana
AT2G36985 0.5kb downstream 0.5kb downstream 914 true Chr2: 15534279-15535192 Arabidopsis thaliana
AT2G36985 0.5kb downstream 0.5kb downstream 500 false Chr2: 15534279-15534778 Arabidopsis thaliana
AT2G36985 1.0kb upstream 1.0kb upstream 1414 true Chr2: 15534779-15536192 Arabidopsis thaliana
AT2G36985 1.0kb upstream 1.0kb upstream 1000 false Chr2: 15535193-15536192 Arabidopsis thaliana
AT2G36985 1.0kb downstream 1.0kb downstream 1414 true Chr2: 15533779-15535192 Arabidopsis thaliana
AT2G36985 1.0kb downstream 1.0kb downstream 1000 false Chr2: 15533779-15534778 Arabidopsis thaliana
AT2G36985 2.0kb upstream 2.0kb upstream 2414 true Chr2: 15534779-15537192 Arabidopsis thaliana
AT2G36985 2.0kb upstream 2.0kb upstream 2000 false Chr2: 15535193-15537192 Arabidopsis thaliana
AT2G36985 2.0kb downstream 2.0kb downstream 2414 true Chr2: 15532779-15535192 Arabidopsis thaliana
AT2G36985 2.0kb downstream 2.0kb downstream 2000 false Chr2: 15532779-15534778 Arabidopsis thaliana
AT2G36985 5.0kb upstream 5.0kb upstream 5414 true Chr2: 15534779-15540192 Arabidopsis thaliana
AT2G36985 5.0kb upstream 5.0kb upstream 5000 false Chr2: 15535193-15540192 Arabidopsis thaliana
AT2G36985 5.0kb downstream 5.0kb downstream 5414 true Chr2: 15529779-15535192 Arabidopsis thaliana
AT2G36985 5.0kb downstream 5.0kb downstream 5000 false Chr2: 15529779-15534778 Arabidopsis thaliana
AT2G36985 10.0kb upstream 10.0kb upstream 10414 true Chr2: 15534779-15545192 Arabidopsis thaliana
AT2G36985 10.0kb upstream 10.0kb upstream 10000 false Chr2: 15535193-15545192 Arabidopsis thaliana
AT2G36985 10.0kb downstream 10.0kb downstream 10414 true Chr2: 15524779-15535192 Arabidopsis thaliana
AT2G36985 10.0kb downstream 10.0kb downstream 10000 false Chr2: 15524779-15534778 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379925 5261 Brassicaceae View MSA
123802483 5264 Brassicales-Malvales View MSA
124299675 5266 SBM View MSA
124253122 5268 Malvidae View MSA
124065895 5270 Rosid View MSA
123751811 5271 Pentapetalae View MSA
122789066 5272 Eudicot View MSA
122048565 5273 Angiosperm View MSA
121346075 5274 Embryophyte View MSA
123380321 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.321        
cufflinks 0.803       High
cufflinks 0.11     Low Low
cufflinks 0.243     Low  
cufflinks 0.39        
cufflinks 0.607        

0 Strain