Gene : SOBIR1 A. thaliana TAIR10
Primary Identifier:  ? AT2G31880 Defline:  (1 of 1) PTHR27000//PTHR27000:SF9 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE/TYROSINE-PROTEIN KINASE SOBIR1
Genomic Order:  2496 Name:  ? AT2G31880
Secondary Identifier:  ? PAC:19641031
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G31880 0.5kb upstream 0.5kb upstream 2584 true Chr2: 13554394-13556977 Arabidopsis thaliana
AT2G31880 0.5kb upstream 0.5kb upstream 500 false Chr2: 13554394-13554893 Arabidopsis thaliana
AT2G31880 0.5kb downstream 0.5kb downstream 2584 true Chr2: 13554894-13557477 Arabidopsis thaliana
AT2G31880 0.5kb downstream 0.5kb downstream 500 false Chr2: 13556978-13557477 Arabidopsis thaliana
AT2G31880 1.0kb upstream 1.0kb upstream 3084 true Chr2: 13553894-13556977 Arabidopsis thaliana
AT2G31880 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13553894-13554893 Arabidopsis thaliana
AT2G31880 1.0kb downstream 1.0kb downstream 3084 true Chr2: 13554894-13557977 Arabidopsis thaliana
AT2G31880 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13556978-13557977 Arabidopsis thaliana
AT2G31880 2.0kb upstream 2.0kb upstream 4084 true Chr2: 13552894-13556977 Arabidopsis thaliana
AT2G31880 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13552894-13554893 Arabidopsis thaliana
AT2G31880 2.0kb downstream 2.0kb downstream 4084 true Chr2: 13554894-13558977 Arabidopsis thaliana
AT2G31880 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13556978-13558977 Arabidopsis thaliana
AT2G31880 5.0kb upstream 5.0kb upstream 7084 true Chr2: 13549894-13556977 Arabidopsis thaliana
AT2G31880 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13549894-13554893 Arabidopsis thaliana
AT2G31880 5.0kb downstream 5.0kb downstream 7084 true Chr2: 13554894-13561977 Arabidopsis thaliana
AT2G31880 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13556978-13561977 Arabidopsis thaliana
AT2G31880 10.0kb upstream 10.0kb upstream 12084 true Chr2: 13544894-13556977 Arabidopsis thaliana
AT2G31880 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13544894-13554893 Arabidopsis thaliana
AT2G31880 10.0kb downstream 10.0kb downstream 12084 true Chr2: 13554894-13566977 Arabidopsis thaliana
AT2G31880 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13556978-13566977 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371850 5261 Brassicaceae View MSA
123836126 5264 Brassicales-Malvales View MSA
124340748 5266 SBM View MSA
124243198 5268 Malvidae View MSA
124066078 5270 Rosid View MSA
123748956 5271 Pentapetalae View MSA
122785949 5272 Eudicot View MSA
122046333 5273 Angiosperm View MSA
121347860 5274 Embryophyte View MSA
123380655 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 325.305     High High
cufflinks 76.248     High  
cufflinks 100.74     High  
cufflinks 65.124     High  
cufflinks 100.877     High  
cufflinks 68.872     High  

0 Strain