Gene : AT2G32000 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11390:SF20 - DNA TOPOISOMERASE 3-BETA-1 Genomic Order:  2513
Name:  ? AT2G32000 Secondary Identifier:  ? PAC:19638735
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G32000 0.5kb upstream 0.5kb upstream 6242 true Chr2: 13615900-13622141 Arabidopsis thaliana
AT2G32000 0.5kb upstream 0.5kb upstream 500 false Chr2: 13621642-13622141 Arabidopsis thaliana
AT2G32000 0.5kb downstream 0.5kb downstream 6242 true Chr2: 13615400-13621641 Arabidopsis thaliana
AT2G32000 0.5kb downstream 0.5kb downstream 500 false Chr2: 13615400-13615899 Arabidopsis thaliana
AT2G32000 1.0kb upstream 1.0kb upstream 6742 true Chr2: 13615900-13622641 Arabidopsis thaliana
AT2G32000 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13621642-13622641 Arabidopsis thaliana
AT2G32000 1.0kb downstream 1.0kb downstream 6742 true Chr2: 13614900-13621641 Arabidopsis thaliana
AT2G32000 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13614900-13615899 Arabidopsis thaliana
AT2G32000 2.0kb upstream 2.0kb upstream 7742 true Chr2: 13615900-13623641 Arabidopsis thaliana
AT2G32000 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13621642-13623641 Arabidopsis thaliana
AT2G32000 2.0kb downstream 2.0kb downstream 7742 true Chr2: 13613900-13621641 Arabidopsis thaliana
AT2G32000 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13613900-13615899 Arabidopsis thaliana
AT2G32000 5.0kb upstream 5.0kb upstream 10742 true Chr2: 13615900-13626641 Arabidopsis thaliana
AT2G32000 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13621642-13626641 Arabidopsis thaliana
AT2G32000 5.0kb downstream 5.0kb downstream 10742 true Chr2: 13610900-13621641 Arabidopsis thaliana
AT2G32000 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13610900-13615899 Arabidopsis thaliana
AT2G32000 10.0kb upstream 10.0kb upstream 15742 true Chr2: 13615900-13631641 Arabidopsis thaliana
AT2G32000 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13621642-13631641 Arabidopsis thaliana
AT2G32000 10.0kb downstream 10.0kb downstream 15742 true Chr2: 13605900-13621641 Arabidopsis thaliana
AT2G32000 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13605900-13615899 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041072 5273 Angiosperm View MSA
122361592 5261 Brassicaceae View MSA
123833810 5264 Brassicales-Malvales View MSA
124321900 5266 SBM View MSA
124237644 5268 Malvidae View MSA
124073148 5270 Rosid View MSA
123740785 5271 Pentapetalae View MSA
122785761 5272 Eudicot View MSA
121346575 5274 Embryophyte View MSA
123425013 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.064        
cufflinks 2.755       High
cufflinks 2.037        
cufflinks 2.744        
cufflinks 2.034        
cufflinks 2.625        

0 Strain