Gene : AT2G41400 A. thaliana TAIR10
Defline:  (1 of 5) PTHR34458:SF5 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  3534
Name:  ? AT2G41400 Secondary Identifier:  ? PAC:19639329
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G41400 0.5kb upstream 0.5kb upstream 1164 true Chr2: 17258957-17260120 Arabidopsis thaliana
AT2G41400 0.5kb upstream 0.5kb upstream 500 false Chr2: 17258957-17259456 Arabidopsis thaliana
AT2G41400 0.5kb downstream 0.5kb downstream 1164 true Chr2: 17259457-17260620 Arabidopsis thaliana
AT2G41400 0.5kb downstream 0.5kb downstream 500 false Chr2: 17260121-17260620 Arabidopsis thaliana
AT2G41400 1.0kb upstream 1.0kb upstream 1664 true Chr2: 17258457-17260120 Arabidopsis thaliana
AT2G41400 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17258457-17259456 Arabidopsis thaliana
AT2G41400 1.0kb downstream 1.0kb downstream 1664 true Chr2: 17259457-17261120 Arabidopsis thaliana
AT2G41400 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17260121-17261120 Arabidopsis thaliana
AT2G41400 2.0kb upstream 2.0kb upstream 2664 true Chr2: 17257457-17260120 Arabidopsis thaliana
AT2G41400 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17257457-17259456 Arabidopsis thaliana
AT2G41400 2.0kb downstream 2.0kb downstream 2664 true Chr2: 17259457-17262120 Arabidopsis thaliana
AT2G41400 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17260121-17262120 Arabidopsis thaliana
AT2G41400 5.0kb upstream 5.0kb upstream 5664 true Chr2: 17254457-17260120 Arabidopsis thaliana
AT2G41400 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17254457-17259456 Arabidopsis thaliana
AT2G41400 5.0kb downstream 5.0kb downstream 5664 true Chr2: 17259457-17265120 Arabidopsis thaliana
AT2G41400 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17260121-17265120 Arabidopsis thaliana
AT2G41400 10.0kb upstream 10.0kb upstream 10664 true Chr2: 17249457-17260120 Arabidopsis thaliana
AT2G41400 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17249457-17259456 Arabidopsis thaliana
AT2G41400 10.0kb downstream 10.0kb downstream 10664 true Chr2: 17259457-17270120 Arabidopsis thaliana
AT2G41400 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17260121-17270120 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121493769 5273 Angiosperm Singleton cluster - no MSA
122329219 5261 Brassicaceae Singleton cluster - no MSA
123770534 5264 Brassicales-Malvales Singleton cluster - no MSA
124269072 5266 SBM Singleton cluster - no MSA
124125235 5268 Malvidae Singleton cluster - no MSA
123854218 5270 Rosid Singleton cluster - no MSA
123440245 5271 Pentapetalae Singleton cluster - no MSA
122475834 5272 Eudicot Singleton cluster - no MSA
120767143 5274 Embryophyte Singleton cluster - no MSA
122809541 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain