Gene : GLU2 A. thaliana TAIR10
Primary Identifier:  ? AT2G41220 Defline:  (1 of 2) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase
Genomic Order:  3514 Name:  ? AT2G41220
Secondary Identifier:  ? PAC:19638080
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CITRULBIO-PWY Arabidopsis thaliana pathologic  
Athaliana GLUTAMINDEG-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-3282 Arabidopsis thaliana pathologic  
Athaliana PWY-4341 Arabidopsis thaliana pathologic  
Athaliana PWY-6549 Arabidopsis thaliana pathologic  
Athaliana PWY-6964 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G41220 0.5kb upstream 0.5kb upstream 11588 true Chr2: 17177164-17188751 Arabidopsis thaliana
AT2G41220 0.5kb upstream 0.5kb upstream 500 false Chr2: 17177164-17177663 Arabidopsis thaliana
AT2G41220 0.5kb downstream 0.5kb downstream 11588 true Chr2: 17177664-17189251 Arabidopsis thaliana
AT2G41220 0.5kb downstream 0.5kb downstream 500 false Chr2: 17188752-17189251 Arabidopsis thaliana
AT2G41220 1.0kb upstream 1.0kb upstream 12088 true Chr2: 17176664-17188751 Arabidopsis thaliana
AT2G41220 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17176664-17177663 Arabidopsis thaliana
AT2G41220 1.0kb downstream 1.0kb downstream 12088 true Chr2: 17177664-17189751 Arabidopsis thaliana
AT2G41220 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17188752-17189751 Arabidopsis thaliana
AT2G41220 2.0kb upstream 2.0kb upstream 13088 true Chr2: 17175664-17188751 Arabidopsis thaliana
AT2G41220 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17175664-17177663 Arabidopsis thaliana
AT2G41220 2.0kb downstream 2.0kb downstream 13088 true Chr2: 17177664-17190751 Arabidopsis thaliana
AT2G41220 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17188752-17190751 Arabidopsis thaliana
AT2G41220 5.0kb upstream 5.0kb upstream 16088 true Chr2: 17172664-17188751 Arabidopsis thaliana
AT2G41220 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17172664-17177663 Arabidopsis thaliana
AT2G41220 5.0kb downstream 5.0kb downstream 16088 true Chr2: 17177664-17193751 Arabidopsis thaliana
AT2G41220 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17188752-17193751 Arabidopsis thaliana
AT2G41220 10.0kb upstream 10.0kb upstream 21088 true Chr2: 17167664-17188751 Arabidopsis thaliana
AT2G41220 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17167664-17177663 Arabidopsis thaliana
AT2G41220 10.0kb downstream 10.0kb downstream 21088 true Chr2: 17177664-17198751 Arabidopsis thaliana
AT2G41220 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17188752-17198751 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511077 5273 Angiosperm View MSA
122371936 5261 Brassicaceae View MSA
123800262 5264 Brassicales-Malvales View MSA
124297698 5266 SBM View MSA
124149522 5268 Malvidae View MSA
123875316 5270 Rosid View MSA
123459159 5271 Pentapetalae View MSA
122494554 5272 Eudicot View MSA
120784144 5274 Embryophyte View MSA
122826079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.277        
cufflinks 22.925        
cufflinks 4.118       Low
cufflinks 28.679       High
cufflinks 6.211        
cufflinks 21.392        

0 Strain