Gene : AT2G41190 A. thaliana TAIR10
Defline:  (1 of 6) K15015 - solute carrier family 32 (vesicular inhibitory amino acid transporter) (SLC32A, VGAT) Genomic Order:  3511
Name:  ? AT2G41190 Secondary Identifier:  ? PAC:19642522
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G41190 0.5kb upstream 0.5kb upstream 3629 true Chr2: 17167279-17170907 Arabidopsis thaliana
AT2G41190 0.5kb upstream 0.5kb upstream 500 false Chr2: 17170408-17170907 Arabidopsis thaliana
AT2G41190 0.5kb downstream 0.5kb downstream 3629 true Chr2: 17166779-17170407 Arabidopsis thaliana
AT2G41190 0.5kb downstream 0.5kb downstream 500 false Chr2: 17166779-17167278 Arabidopsis thaliana
AT2G41190 1.0kb upstream 1.0kb upstream 4129 true Chr2: 17167279-17171407 Arabidopsis thaliana
AT2G41190 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17170408-17171407 Arabidopsis thaliana
AT2G41190 1.0kb downstream 1.0kb downstream 4129 true Chr2: 17166279-17170407 Arabidopsis thaliana
AT2G41190 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17166279-17167278 Arabidopsis thaliana
AT2G41190 2.0kb upstream 2.0kb upstream 5129 true Chr2: 17167279-17172407 Arabidopsis thaliana
AT2G41190 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17170408-17172407 Arabidopsis thaliana
AT2G41190 2.0kb downstream 2.0kb downstream 5129 true Chr2: 17165279-17170407 Arabidopsis thaliana
AT2G41190 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17165279-17167278 Arabidopsis thaliana
AT2G41190 5.0kb upstream 5.0kb upstream 8129 true Chr2: 17167279-17175407 Arabidopsis thaliana
AT2G41190 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17170408-17175407 Arabidopsis thaliana
AT2G41190 5.0kb downstream 5.0kb downstream 8129 true Chr2: 17162279-17170407 Arabidopsis thaliana
AT2G41190 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17162279-17167278 Arabidopsis thaliana
AT2G41190 10.0kb upstream 10.0kb upstream 13129 true Chr2: 17167279-17180407 Arabidopsis thaliana
AT2G41190 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17170408-17180407 Arabidopsis thaliana
AT2G41190 10.0kb downstream 10.0kb downstream 13129 true Chr2: 17157279-17170407 Arabidopsis thaliana
AT2G41190 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17157279-17167278 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378551 5261 Brassicaceae View MSA
123827928 5264 Brassicales-Malvales View MSA
124344035 5266 SBM View MSA
124243157 5268 Malvidae View MSA
124067158 5270 Rosid View MSA
123753416 5271 Pentapetalae View MSA
122789059 5272 Eudicot View MSA
122047534 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.757        
cufflinks 7.101        
cufflinks 5.669        
cufflinks 10.417       High
cufflinks 10.02       High
cufflinks 4.651       Low

0 Strain