Gene : AT2G40960 A. thaliana TAIR10
Defline:  (1 of 4) PTHR15672//PTHR15672:SF15 - CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN // EXPRESSED PROTEIN Genomic Order:  3486
Name:  ? AT2G40960 Secondary Identifier:  ? PAC:19641686
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40960 0.5kb upstream 0.5kb upstream 2433 true Chr2: 17095022-17097454 Arabidopsis thaliana
AT2G40960 0.5kb upstream 0.5kb upstream 500 false Chr2: 17095022-17095521 Arabidopsis thaliana
AT2G40960 0.5kb downstream 0.5kb downstream 2433 true Chr2: 17095522-17097954 Arabidopsis thaliana
AT2G40960 0.5kb downstream 0.5kb downstream 500 false Chr2: 17097455-17097954 Arabidopsis thaliana
AT2G40960 1.0kb upstream 1.0kb upstream 2933 true Chr2: 17094522-17097454 Arabidopsis thaliana
AT2G40960 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17094522-17095521 Arabidopsis thaliana
AT2G40960 1.0kb downstream 1.0kb downstream 2933 true Chr2: 17095522-17098454 Arabidopsis thaliana
AT2G40960 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17097455-17098454 Arabidopsis thaliana
AT2G40960 2.0kb upstream 2.0kb upstream 3933 true Chr2: 17093522-17097454 Arabidopsis thaliana
AT2G40960 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17093522-17095521 Arabidopsis thaliana
AT2G40960 2.0kb downstream 2.0kb downstream 3933 true Chr2: 17095522-17099454 Arabidopsis thaliana
AT2G40960 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17097455-17099454 Arabidopsis thaliana
AT2G40960 5.0kb upstream 5.0kb upstream 6933 true Chr2: 17090522-17097454 Arabidopsis thaliana
AT2G40960 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17090522-17095521 Arabidopsis thaliana
AT2G40960 5.0kb downstream 5.0kb downstream 6933 true Chr2: 17095522-17102454 Arabidopsis thaliana
AT2G40960 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17097455-17102454 Arabidopsis thaliana
AT2G40960 10.0kb upstream 10.0kb upstream 11933 true Chr2: 17085522-17097454 Arabidopsis thaliana
AT2G40960 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17085522-17095521 Arabidopsis thaliana
AT2G40960 10.0kb downstream 10.0kb downstream 11933 true Chr2: 17095522-17107454 Arabidopsis thaliana
AT2G40960 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17097455-17107454 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343273 5261 Brassicaceae View MSA
123783523 5264 Brassicales-Malvales View MSA
124281752 5266 SBM View MSA
124136456 5268 Malvidae View MSA
123864313 5270 Rosid View MSA
123753124 5271 Pentapetalae View MSA
122794713 5272 Eudicot View MSA
122048574 5273 Angiosperm View MSA
123428874 5275 Viridiplantae View MSA
121347562 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.164        
cufflinks 4.24        
cufflinks 16.888       High
cufflinks 4.163        
cufflinks 16.782       High
cufflinks 3.111       Low

0 Strain