Gene : RR16 A. thaliana TAIR10
Primary Identifier:  ? AT2G40670 Defline:  (1 of 2) PTHR26402//PTHR26402:SF521 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // TWO-COMPONENT RESPONSE REGULATOR ARR16-RELATED
Genomic Order:  3451 Name:  ? AT2G40670
Secondary Identifier:  ? PAC:19640284
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40670 0.5kb upstream 0.5kb upstream 1505 true Chr2: 16969730-16971234 Arabidopsis thaliana
AT2G40670 0.5kb upstream 0.5kb upstream 500 false Chr2: 16969730-16970229 Arabidopsis thaliana
AT2G40670 0.5kb downstream 0.5kb downstream 1505 true Chr2: 16970230-16971734 Arabidopsis thaliana
AT2G40670 0.5kb downstream 0.5kb downstream 500 false Chr2: 16971235-16971734 Arabidopsis thaliana
AT2G40670 1.0kb upstream 1.0kb upstream 2005 true Chr2: 16969230-16971234 Arabidopsis thaliana
AT2G40670 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16969230-16970229 Arabidopsis thaliana
AT2G40670 1.0kb downstream 1.0kb downstream 2005 true Chr2: 16970230-16972234 Arabidopsis thaliana
AT2G40670 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16971235-16972234 Arabidopsis thaliana
AT2G40670 2.0kb upstream 2.0kb upstream 3005 true Chr2: 16968230-16971234 Arabidopsis thaliana
AT2G40670 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16968230-16970229 Arabidopsis thaliana
AT2G40670 2.0kb downstream 2.0kb downstream 3005 true Chr2: 16970230-16973234 Arabidopsis thaliana
AT2G40670 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16971235-16973234 Arabidopsis thaliana
AT2G40670 5.0kb upstream 5.0kb upstream 6005 true Chr2: 16965230-16971234 Arabidopsis thaliana
AT2G40670 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16965230-16970229 Arabidopsis thaliana
AT2G40670 5.0kb downstream 5.0kb downstream 6005 true Chr2: 16970230-16976234 Arabidopsis thaliana
AT2G40670 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16971235-16976234 Arabidopsis thaliana
AT2G40670 10.0kb upstream 10.0kb upstream 11005 true Chr2: 16960230-16971234 Arabidopsis thaliana
AT2G40670 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16960230-16970229 Arabidopsis thaliana
AT2G40670 10.0kb downstream 10.0kb downstream 11005 true Chr2: 16970230-16981234 Arabidopsis thaliana
AT2G40670 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16971235-16981234 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375107 5261 Brassicaceae View MSA
123839154 5264 Brassicales-Malvales View MSA
124339072 5266 SBM View MSA
124249689 5268 Malvidae View MSA
124062080 5270 Rosid View MSA
123748366 5271 Pentapetalae View MSA
122792334 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.683        
cufflinks 0.714        
cufflinks 11.541       High
cufflinks 0.735        
cufflinks 5.575        
cufflinks 0.259     Low Low

0 Strain